can a OOM be caused by not finding enough contiguous memory? - java

I start some java code with -Xmx1024m, and at some point I get an hprof due to OOM. The hprof shows just 320mb, and give me a stack trace:
at java.util.Arrays.copyOfRange([CII)[C (Arrays.java:3209)
at java.lang.String.<init>([CII)V (String.java:215)
at java.lang.StringBuilder.toString()Ljava/lang/String; (StringBuilder.java:430)
...
This comes from a large string I am copying.
I remember reading somewhere (cannot find where) what happened is these cases is:
process still has not consumed 1gb of memory, is way below
even if heap still below 1gb, it needs some amount of memory, and for copyOfRange() it has to be continuous memory, so even if it is not over the limit yet, it cannot find a large enough piece of memory on the host, it fails with an OOM.
I have tried to look for doc on this (copyOfRange() needs a block of continuous memory), but could not find any.
The other possible culprit would be not enough permgen memory.
Can someone confirm or refute the continuous memory hypothesis? Any pointer to some doc would help too.

If you are using the concurrent mark sweep collector you can get fragmentation. however for new objects, provided there is a enough young generation space you don't need to worry about fragmentation as the free Eden space is always continuous.
In many applications, only a small portion of the heap is given to the young generation so if you have a fragmented tenured space and you create a relatively small object (as small as 5% of the maximum memory size) you can get an OutOfMemoryError.
Given you will have very poor performance if you run close to the maximum memory, I would suggest you either make you application use less memory or increase the maximum. This increases the your generation size as well. Alternatively you could set -XX:NewSize=512m

Related

How to pre-allocate max heap space on Android

I am working on an image processing app that needs a lot of heap space, and am sending these images over the wire. The problem is that each image results in message like
Grow heap (frag case) to 16.38M for 1536000 byte allocation
This growing seems to be taking a long time, since when I send the images from a computer it takes 1 second, but with my android app it take about 1 minute 30 seconds.
My question is, is there a way to pre-allocate the max heap size so that the heap doesn't have to keep growing?
... is there a way to pre-allocate the max heap size so that the heap doesn't have to keep growing?
I don't think so. Reading through the Android memory management article reveals nothing.
In classic Java, you can set an initial heap size to avoid the performance overhead of continually growing the heap. But the assumption on Android seems to be that you should be trying to minimize memory usage at all times.
You might get some "joy" if you simply allocate a very large array and immediately make it unreachable. The GC should grow the heap so that it can hold the array ... and the space occupied by the array will typically be recycled and made available on the next GC cycle. On the other hand, when the GC reclaims a huge amount of memory, it might shrink the heap to give most of the space back to the operating system.
Having said that, you would probably be advised to change your app so that it doesn't need to hold lots of images in memory. It sounds to me like you might have a memory leak of some type. Read these links:
https://developer.android.com/training/articles/memory.html
https://developer.android.com/tools/debugging/debugging-memory.html
https://developer.android.com/training/displaying-bitmaps/manage-memory.html

Java heap size not entirely used

I'm currently monitoring my running java application with Visual VM: http://visualvm.java.net/
I'm stressing the memory usage by with -Xmx128m.
When running I see the heap size increasing to 128m (as expected) however the used heap converges to approximately 105m before I run into a java heap space error.
Why are these remaining 20m, not used?
You need to understand a central fact about garbage collector ergonomics:
The costly part of garbage collection is finding and dealing with the objects that are NOT garbage.
This means: as the heap gets close to its maximum capacity, the GC will spend more and more time for less and less return in reclaimed space. If the GC was to try and use every last byte of memory, the net result would be that your JVM would spend more and more time garbage collecting, until ... eventually ... almost no useful work was being done.
To avoid this pathological situation, the JVM monitors the ratio of time is spent GC'ing and doing useful work. When the ratio exceeds a configurable threshold value, the GC raises an OutOfMemoryError ... even though (technically) there is free memory available. This is probably what you are seeing, though the other explanations are equally plausible.
You can change the GC thresholds, generation sizes, etc via JVM options, but it is probably better not to. A better idea is to figure out why your application's memory usage is continually creeping upwards. There are most likely memory leaks ... i.e. a bugs ... in your code that are causing this. Spend your effort finding and fixing those bugs, rather than worrying about why you are not using all of the memory.
(In fact, you are using it ... but not all of the time.)
The heap is split up in Young-Generation (Eden-Space, and two Survivor-Spaces of identical size usually called From and To), Old Generation (Tenured) and Permanent Space.
The Xmx/Xms option sets the overall heap size. So a region (with a default size) is actually the Permanent Space - and maybe, we don't know details about your stress test, no objects are actually moved from eden to tenured or permanent, so those regions remain empty while Eden runs out of space.
Java splits its memory into generations. You can get a heap space error if the tenured generation fills. Normally, they resize dynamically but if you have set a fixed size it won't.

Heap memory behaviour

I always had a question about heap memory behaviour.
Profiling my app i get the above graph. Seems all fine. But what i don't understand why,at GC time, the heap grows a litle bit, even there is enough memory (red circle).
That means for a long running app that it will run out of heap space at some time ?
Not necessarily. The garbage collector is free to use up to the maximum allocated heap in any way it sees fit. Extrapolating future GC behaviour based on current behaviour (but with different memory conditions) is in no way guaranteed to be accurate.
This does have the unfortunate side effect that it's very difficult to determine whether an OutOfMemoryError is going to happen unless it does. A legal (yet probably quite inefficient) garbage collector could simply do nothing until the memory ceiling was hit, then do a stop-the-world mark and sweep of the entire heap. With this implementation, you'd see your memory constantly increasing, and might be tempted to say that an OOME was imminent, but you just can't tell.
With such small heap sizes, the increase here is likely just due to bookkeeping/cache size alignment/etc. You're talking about less than 50KB or so looking at the resolution on the scale, so I shouldn't be worried.
If you do think there's a legitimate risk of OutOfMemoryErrors, the only way to show this is to put a stress test together and show that the application really does run out of heap space.
The HotSpot garbage collectors decide to increase the total heap size immediately after a full GC has completed if the ratio of free space to total heap size falls below a certain threshold. This ratio can be tuned using one of the many -XX options for the garbage collector(s).
Looking at the memory graph, you will see that the heap size increases occur at the "saw points"; i.e. the local maxima. Each of these correspond to running a full GC. If you look really carefully at the "points" where the heap gets expanded, you will see that in each case the amount of free space immediately following the full GC is a bit higher than the previous such "point".
I image that what is happening is that you application's memory usage is cyclical. If the GC runs at or near a high point of the cycle, it won't be able to free as much memory as if the GC runs at or near a low point. This variability may be enough to cause the GC to expand the heap.
(Another possibility is that your application has a slow memory leak.)
That means for a long running app that it will run out of heap space at some time ?
No. Assuming that your application's memory usage (i.e. the integral of space occupied by reachable objects) is cyclic, the heap size will approach a fixed high limit and never exceed it. Certainly OOME's are not inevitable.

Java heap keeps on shrinking! What is happening in this graph of heap size?

This is a screen shot of a JVM (win64, 6u17) running ActiveMQ, after every garbage collection the heap size is reducing. As the heap size reduces garbage collection gets more frequent and the heap reduces more quickly. Eventually the VM locks up as it's spending all it's time in GC.
-Xms is the default and -Xmx is 2048mb.
What is happening!!? How can I avoid this?
http://imagebin.org/92614
Shrinking heap http://imagebin.org/index.php?mode=image&id=92614
n.b originally posted on serverfault.com, moved to stackoverflow.com as requested
Google found me the following, from the IBM JVM FAQ (how's that for an NLA):
When does the Java heap shrink?
Heap shrinkage occurs when GC determines that there is a lot of free heap storage, and releasing some heap memory is beneficial for system performance. Heap shrinkage occurs after GC, but when all the threads are still suspended.
The Sun JVM does something similar. Below is an excerpt from an Oracle Technology Network article entitled Ergonomics in the 5.0 Java Virtual Machine.
The heap will grow or shrink to a size that will support the chosen throughput goal. Some oscillations in the size of the heap during initialization and during a change in the application's behavior can be expected.
...
It is typical that the size of the heap will oscillate as the garbage collector tries to satisfy competing goals. This is true even if the application has reached a steady state. The pressure to achieve a throughput goal (which may require a larger heap) competes with the goals for a maximum pause time and a minimum footprint (which both may require a small heap).
I suggest you have a look at the rest of that document; it may have more information relevant to your problem.
There is a JVM argument that controls when the heap is resized.
-XX:MaxHeapFreeRatio
The default value for this is 70. The free ratio is the amount of space not allocated on the heap over the total heap size. It the percentage of free space rises above the default of 70% the jvm will rreduce the size of the heap to allow the OS to use the memory.
If the heap is shrinking too often you can increase the value of -XX:MaxHeapFreeRatio. If it is set to 100 presumably it will never skrink.
Just a guess:
It looks like the system is pretty much idle. There might be some caching going on, and stuff drops out of the cache and gets gc'd. Or since it is a queuing system, maybe it has some messages, in the queue, which slowly get delivered and gc'd afterwards.
The increased frequence of gc-runs might be due to ever decreasing load on the system.
As to how to avoid it. Why do you want to avoid it? It seems like your CPU load is zero. So you are free to let the gc do whatever it wants

Why is the maximum size of the Java heap fixed?

It is not possible to increase the maximum size of Java's heap after the VM has started. What are the technical reasons for this? Do the garbage collection algorithms depend on having a fixed amount of memory to work with? Or is it for security reasons, to prevent a Java application from DOS'ing other applications on the system by consuming all available memory?
In Sun's JVM, last I knew, the entire heap must be allocated in a contiguous address space. I imagine that for large heap values, it's pretty hard to add to your address space after startup while ensuring it stays contiguous. You probably need to get it at startup, or not at all. Thus, it is fixed.
Even if it isn't all used immediately, the address space for the entire heap is reserved at startup. If it cannot reserve a large enough contiguous block of address space for the value of -Xmx that you pass it, it will fail to start. This is why it's tough to allocate >1.4GB heaps on 32-bit Windows - because it's hard to find contiguous address space in that size or larger, since some DLLs like to load in certain places, fragmenting the address space. This isn't really an issue when you go 64-bit, since there is so much more address space.
This is almost certainly for performance reasons. I could not find a terrific link detailing this further, but here is a pretty good quote from Peter Kessler (full link - be sure to read the comments) that I found when searching. I believe he works on the JVM at Sun.
The reason we need a contiguous memory
region for the heap is that we have a
bunch of side data structures that are
indexed by (scaled) offsets from the
start of the heap. For example, we
track object reference updates with a
"card mark array" that has one byte
for each 512 bytes of heap. When we
store a reference in the heap we have
to mark the corresponding byte in the
card mark array. We right shift the
destination address of the store and
use that to index the card mark array.
Fun addressing arithmetic games you
can't do in Java that you get to (have
to :-) play in C++.
This was in 2004 - I'm not sure what's changed since then, but I am pretty sure it still holds. If you use a tool like Process Explorer, you can see that the virtual size (add the virtual size and private size memory columns) of the Java application includes the total heap size (plus other required space, no doubt) from the point of startup, even though the memory 'used' by the process will be no where near that until the heap starts to fill up...
Historically there has been a reason for this limitiation, which was not to allow Applets in the browser to eat up all of the users memory. The Microsoft VM which never had such a limitiation actually allowed to do this which could lead to some sort of Denial of Service attack against the users computer. It was only a year ago that Sun introduced in the 1.6.0 Update 10 VM a way to let applets specify how much memory they want (limited to a certain fixed share of the physical memory) instead of always limiting them to 64MB even on computers that have 8GB or more available.
Now since the JVM has evolved it should have been possible to get rid of this limitation when the VM is not running inside a browser, but Sun obviously never considered it such a high priority issue even though there have been numerous bug reports been filed to finally allow the heap to grow.
I think the short, snarky, answer is because Sun hasn't found it worth the time and cost to develop.
The most compelling use case for such a feature is on the desktop, IMO, and Java has always been a disaster on the desktop when it comes to the mechanics of launching the JVM. I suspect that those who think the most about those issues tend to focus on the server side and view any other details best left to native wrappers. It is an unfortunate decision, but it should just be one of the decision points when deciding on the right platform for an application.
My gut feel is that it has to do with memory management with respect to the other applications running on the operating system.
If you set the maximum heap size to, for example, the amount of RAM on the box you effectively let the VM decide how much memory it requires (up to this limit). The problem with this is that the VM could effectively cripple the machine it is running on because it will take over all the memory on the box before it decides that it needs to garbage collect.
When you specify max heap size, what you're saying to the VM is, you are allowed to use this amount of memory before you need to start garbage collecting. You cannot have more because if you take more then the other applications running on the box will slow down and you will start swapping to the disk if you use more than this.
Also be aware that they are two values with respect to memory, that is "current heap size" and "max heap size". The current heap size is how much memory the heap size is currently using and, if it requires more it can resize the heap but it cannot resize the heap above the value of maximum heap size.
From IBM's performance tuning tips (so may not be directly applicable to Sun's VMs)
The Java heap parameters influence the behavior of garbage collection. Increasing the heap size supports more object creation. Because a large heap takes longer to fill, the application runs longer before a garbage collection occurs. However, a larger heap also takes longer to compact and causes garbage collection to take longer.
The JVM has thresholds it uses to manage the JVM's storage. When the thresholds are reached, the garbage collector gets invoked to free up unused storage. Therefore, garbage collection can cause significant degradation of Java performance. Before changing the initial and maximum heap sizes, you should consider the following information:
In the majority of cases you should set the maximum JVM heap size to value higher than the initial JVM heap size. This allows for the JVM to operate efficiently during normal, steady state periods within the confines of the initial heap but also to operate effectively during periods of high transaction volume by expanding the heap up to the maximum JVM heap size. In some rare cases where absolute optimal performance is required you might want to specify the same value for both the initial and maximum heap size. This will eliminate some overhead that occurs when the JVM needs to expand or contract the size of the JVM heap. Make sure the region is large enough to hold the specified JVM heap.
Beware of making the Initial Heap Size too large. While a large heap size initially improves performance by delaying garbage collection, a large heap size ultimately affects response time when garbage collection eventually kicks in because the collection process takes more time.
So, I guess the reason that you can't change the value at runtime is because it may not help: either you have enough space in your heap or you don't. Once you run out, a GC cycle will be triggered. If that doesn't free up the space, you're stuffed anyway. You'd need to catch the OutOfMemoryException, increase the heap size, and then retry you calculation, hoping that this time you have enough memory.
In general the VM won't use the maximum heap size unless you need it, so if you think you might need to expand the memory at runtime, you could just specify a large maximum heap size.
I admit that's all a bit unsatisfying, and seems a bit lazy, since I can imagine a reasonable garbage collection strategy which would increase the heap size when GC fails to free enough space. Whether my imagination translates to a high performance GC implementation is another matter though ;)

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