Develop Reference

IntelliJ IDEA - Decompiling/Editing/Recompiling JAR

I realize this may seem like a completely stupid question and this question is a "wall of text", but I'm feeling like I've gotten way out of my depth here and need some guidance. I've read several SO questions on this topic, but still can't seem to find one that addresses this particular situation. (please reference update(s) at the end of this post)
BACKGROUND
Our company has an application that was built in Java and released as an executable JAR package by a developer who passed away a couple of years ago. Since then, there has been minimal need for even looking at that code, let alone making any changes. That's been really good because I do my programming in VB.NET (Visual Studio) and, while I can read and make sense of Java code, I'm not proficient in actually writing/debugging that code.
However, a recent issue has come up that forced me to try to take a look at this Java code due to some internal changes in organization and data structure. I've looked in his "src\" directory and found older versions of his original code but wasn't able to find the most recent version anywhere. I found some code that made it possible for me to extract the JAR that's currently being used to a local directory on CodeProject (JarsVB), so I've been able to look over some of the .java files when trying to figure out what query is being used for some random operation. I don't know what tool(s) the original developer used to create the project/JAR, so I've installed the IntelliJ IDEA Community Edition 2018 as an IDE, and it's worked for me so far to simply view the code so I can understand a bit about what it's doing.
PROBLEM/GOALS
Unfortunately, now there is a need for me to make a change to the Java code and update the JAR, and this is where I can't seem to make heads or tails of what I need to do. I have my local copy of the code from the "unzipped" JAR containing all the .java and .class files (along with all the other resources), but I'm not sure how to go from that to modifying the code and recompiling the executable JAR.
So, my goals here are as follows:
(properly) Decompile the existing executable JAR. (If the JarsVB solution I mentioned above did what it was supposed to do, I should already have this part handled, but if there's a better, more "integrated" way of doing it, I'd be open to that as well.)
Modify one or more .java files. (I believe I can figure out the syntax well enough to get this part done.)
Debug/test my changes.
Recompile the changes into an updated executable JAR for release. (THIS is where I'm experiencing the most confusion.)
WHAT I'VE DONE
I've been looking at the documentation for IntelliJ to try to figure out how to make this all happen, but I feel like I'm missing stuff. I set my "Project Structure" settings to point to a specific folder, but I can't seem to get it to actually build anything in my specified path.
I went into one of the .java files and made/saved a small change to test, then went to the Build menu and tried all the building options available to me: "Build Project", "Build Module", and "Rebuild Project". Each time, the event log shows that "All files are up-to-date" (even though I changed one), so I go to my output directory to see what it built, but the folder is empty.
I looked at the IntelliJ documentation for Packaging a Module into a JAR File, which says to
On the main menu, choose Build | Build Artifact
But that option is disabled in my Build menu, and when I look in the Project Structure dialog, the Artifacts section is empty, so I try to add a new setting (Add -> JAR -> From modules with dependencies...), but I'm not sure how to properly set that up either.
I tried to select a Main Class from my classes/ directory, but it wouldn't actually accept any of the .class files I selected, so I just left it blank. Then, I did a search for a MANIFEST file, but couldn't find one anywhere so I left that blank as well. The Build menu option is enabled now, but when I tried to Build Artifact, again, I get nothing in my output directory. In fact, the only files I can find that have changed are in my local working directory. I'm just dumbfounded at this point.
FINAL THOUGHTS/QUESTIONS
I've tried to provide as much detail here as I could think of about all the things I've tried and gone through to get this JAR updated, but if there's a question about anything, please let me know. I'm not looking for a "handout" and I don't expect anyone to do this for me, but I'm also not wanting to become a Java developer just for the sake of making some minor changes to an application that will eventually be replaced by a .NET application. I simply am not familiar enough with the tools or Java development in general to know how to get to where I want to be from where I am.
My decompiled source files are in a totally separate directory from the original, production JAR file because, when I recompile this time, I want to completely recreate the JAR. Am I understanding the Java development process correctly in editing one of the .java files I got from decompiling with the JarsVB and then recompiling the JAR?
Thanks in advance for any assistance in finding the resources I need to accomplish these goals.
EDIT/UPDATE
So, looking at the link in the accepted answer in another SO question, How to build jars from IntelliJ properly?, I figured out at least one part of my issue: Leaving the Main Class setting of my Artifacts configuration blank was a problem. Since I hadn't been able to select a .class file and I wasn't sure how to correctly populate that field, I hadn't given the IDE enough information to operate correctly. I entered the namespace and class (namespace.class) I found in the class file that apparently defines the main method for the application, then set the path for the MANIFISET.MF file to my output directory and tried again to Build Artifact.
This time, at least, it DID produce a JAR in my defined output directory, but it's only 1KB in size. As stated above, the source files are in a completely separate directory from the original JAR file from which they were decompiled. The output directory, too, is completely separate from the location of the original JAR file. Do I need a copy of the original JAR file in the output path for recompiling to work correctly?
I'm making progress, but I'm sure I'm overlooking something "stupid" at this point that's primarily due to my unfamiliarity with the IDE and developing Java applications in general.
UPDATE 2
Looking at another SO question - how to create jar of java package in intelliJ idea - I learned that I have to individually add the necessary files for repackaging into the JAR. However, this brings up the question, what files do I add? The linked question identifies the .class files, but when I go look at the .class files in my working directory, none of those have been updated recently, so it looks like I'm still missing a step somewhere.
Another question this brings up is, are there certain conventions for Java development of which I need to be aware when preparing my environment? I have my output path set to a completely separate folder than any working or production code, so I'm wondering if something in that setup might potentially cause issues.
As I said before, I made a small change to one of the .java files, then tried both the Build Module and Rebuild Project options, but those are still telling me that "All files are up-to-date". Even so, I tried adding just the .class files from under my classes\ directory to my Artifact configuration and tried again to Build Artifact. I got a bit larger file (approx. 5MB), but when I try to execute the JAR, it just doesn't appear to do anything, let alone actually launch the application.
I tried again by adding the root folder of my local copy of the source adding everything the root folder contains. (yes, the directory probably needs some "spring cleaning", but that's for another day)
This time, I got a much larger file this time (approx. 21MB), so I thought I might have fixed the problem. Unfortunately, no such luck. The JAR still doesn't appear to execute.
For reference, the original JAR file from which the code was decompiled is approx. 59MB in size so, either IntelliJ is doing an incredible job with compression, or there's yet another step I haven't yet found. I'm sure this is all a matter of getting my IDE configured correctly, but I just can't seem to find the right combination of settings.

is there a way to make changes in jar which doesnot have source code in it and rebuild it as a jar in eclipse?

Is there a way to make changes in jar which doesnot have source code in it and rebuild it with this change as a jar in eclipse.

You can look into using Java decompilers; in order to turn the .class files within the JAR archive back into .java source code. The process and some tools for that are outlined here.
But: understand that *decompiling" can be a tough business! Plus: there is always the question if the licence terms of the library you are using allows you to do that. Being able to do something isn't the same as being allowed to do that!
Finally: keep in mind that a JAR is just a deployment artifact. A lot of libraries are open source, and you can most often download that source and build the corresponding JARs completely on your own.

Is there an easy way to copy libraries between projects on netbeans?

Often I find that I have a set of JAR files configured as libraries in one Netbeans project and I need the same (or a subset of) those JAR files in another project.
All of the ways I've found to do this so far are very long winded and painful so I am hoping I've missed something simple.
Google found a 6 year old feature request and nothing else really useful: https://netbeans.org/bugzilla/show_bug.cgi?id=118325
At the moment the ways I can think of are:
Create a "Library" for the set of JARS and then use that library in each project. This is probably the neatest way to do this but still involves a lot of steps and seems like massive overkill just to copy a few JAR file references!
Go to source project, right click JAR, select edit. See the library classpath in the popup window. Close window, go to the destination, select add JAR. Can't cut and paste in path so have to hope you remembered it right. Browse to JAR file, add it - repeat for any other JARs that are not in the same folder.
Frustratingly the tooltip that comes up when you hover over the library contains exactly the path you need to add the jar - but there is no way I can find to copy the contents of that tooltip!
This is all made much more painful by the fact that all the windows are modal, you can't cut and paste the path out because it doesn't actually copy as a real path, etc.
All suggestions welcome as this is becoming a frequent annoyance at the moment!

I just found this old question while searching for an answer to the same problem. I Couldn't find any other useful results so I copied the libraries in the nbproject/project.properties file to the same place in my new project.
The only references I found in the whole directory were like this
file.reference.commons-lang3-3.8.1.jar=D:\\Documents\\javaLibraries\\commons-lang\\commons-lang3-3.8.1\\commons-lang3-3.8.1.jar
file.reference. [.....many more]
includes=**
jar.compress=false
javac.classpath=\
${file.reference.commons-lang3-3.8.1.jar}:\
[....many more]:\
This part was just in between what I wanted, so I copied the whole thing but it was the same in the new project.
includes=**
jar.compress=false
So far it's all working fine. You could back up the project.properties file but I already had one nightly.
edit:
You can also copy over the javadoc and sources by copying the lines like
javadoc.reference.commons-lang3-3.8.1.jar=D:\\Documents[more path....]javadoc.jar
source.reference.commons-lang3-3.8.1.jar=D:\\Documents[more path....]sources.jar

Load whole project from Eclipse(about source code)

I am working on buid a plugin of Eclipse. In one step, i load the project through scan classpath,but the feedback from requirement is:
Loading projects encompasses two things:
Loading multiple files from the same
directory/package
Including files from other packages through for instance Eclipse's .classpath files
Since the prototype will be built into an Eclipse plugin anyways, is it fine to use Eclipse stuff, like the .classpath files? you are now loading and reading these files yourself. It might be more convenient to use Eclipse code for this, since it has to be already there.
I have no idea how to deal with it from Eclipse, can anybody help?

I think you're looking for PDE build. You could have a look at this tutorial.

How to open existing Java 'solution' (not developed in Eclipse) using Eclipse?

I've been tasked with picking up someone elses Java code and adding some functionality to it.
I'ved pull down the source tree from CVS and see a bunch of .jar files in different folders. I'm guessing the developer did not use Eclipse.
I am new to Java (coming from .NET background) and have used Eclipse so far to create one Java project. I'm wondering now that I have this guys files (he has classpath.jar and other .jar files along with some subfolders each with 'java' files in them), how do I open them? I tried opening one at a time, etc.. but doesn't seem to work. IS tehre an easy way to do this? I thought there' might be some kind of 'import existing code' thing in Eclipse but I can find it. How can I do this? Do I re-create the folder structure and just add the existing files one a time?
Thanks much for any help

something like 'create project from existing source'?
http://www.stanford.edu/class/cs108/JavaTools/eclipse-guide/
if the existing code is not structured well, you are either going to have to heavily configure your project sources, or just change the project structure.

File -> new
Than select general->folder.
To make developing easier in eclipse i recommend some refactoring to the project.

create a new eclipse project using the parent folder as the home.
every folder that's the root of a hierarchy of java classes becomes a folder in the "source" tab (either on creation, or add through "project->properties").
every jar (at least the ones he's using, there may be extras) gets added in the project->properties libraries tab.
This is assuming that all of the hierarchies belong together and that the thing isn't structured to build little sub-projects out of pieces of the hierarchy. If there's a build file for this thing you might want to be sure that if the build file is doing that you're building things appropriately.

File->Import->General->Existing Projects into Workspace
OR
File->New->Java Project
This will create a sample java project for you. You can add the files appropriately.
Below is an example of a j2ee Project:
http://java.sun.com/blueprints/code/projectconventions.html

If C:\Workspace is the folder you are using as the workspace and you have your existing project placed as "C:\Workspace\ExistingProject"
Open Eclipse Got to File->New Project
Select the type of Project you want to create Use the name as "ExistingProject" for the project and click Finish or complete the remaining steps of project creation wizard normally.
Internally a .project file would be created in the ExistingProject folder and a .metadata folder would be generated under Workspace folder.
If you want to place the ExistingProject not under the workspace u follow the same steps.

There's 2 possibilities:
Import project from file system:
Create a blank Eclipse Project.
Then select File -> Import -> General -> File System. Select project, and point it to your created project.
Importing from CVS
Goto File -> Import -> CVS -> Project from CVS
Enter your CVS Host, Repository Path, Username and Password, and click next,....
Add what you need and click next (follow the instructions) until you're satisfied and click finish.
Hope this helps.
A simple tutorial that incorporates my 1st option and commmits it to CVS: http://thedesignspace.net/MT2archives/000662.html

Two options:
Maven - highly recommended but rather read this: http://maven.apache.org/guides/getting-started/maven-in-five-minutes.html than have me re-write it here. Maven might seem like more effort up front but it pays for itself a hundred times over during the course of even a simple project.
Do it yourself (assuming Helios):
Move the source code Java files to ~/development/MyProject/src/java. Move the jars to ~/development/MyProject/resources.
In Eclipse, File > New > Java Project. Type in your project name.
Untick "Use default location" and browse to ~/development/MyProject.
Select src/java as your source folder (if Eclipse doesn't pick it up automatically).
Finish.
Then, for each error, you will need to find the corresponding JAR and add it as a library to your classpath in the project properties.
The important thing to bear in mind is that Eclipse is not like Visual Studio - you cannot easily just edit one file at a time and that is not what it is designed for. People can get frustrated with Eclipse after working with VS but if you just allow it to do things the way it wants you, your life will be much easier.

trick is finding the root folder. Generally, developers use the following:
project root
-- src
-- bin
at least, what's what Eclipse does by default. There are other ways it can be organized as Maven uses the following:
project root
-- src
-- -- main
-- -- -- java
etc...
More info on how Maven standardizes here:
That said, finding out how the source is organized shouldn't be too hard. Open up one of the .java files and look for the line at the top that starts with "package ". Should be something like this:
package com.somecompany.client.utils
Note, that's just an example, it won't be that exactly although it should start with "package". The value after package represents the path that the file should be in relative to the root of the source folder.
source
folder/com/somecompany/client/utils
So, if you follow the default way that Eclipse organizes things, it should look look like this:
project root
-- src
-- -- com
-- -- -- somecompany
-- -- -- -- client
... etc
SO, as other people have mentioned, you'll import from existing filesystem, point to the folder at the project root. You may need to configure it to point to "src" folder as a source folder. You may also need to import those .jar files into your project as well.
Good luck