Is there something like C's struct in Java? - java

struct is necessary when you try to parse some file format like ELF, etc...
Is there something like C's struct in Java?
Or can Java be used to parse ELF/binary format directly in the first place?

If you need a struct for grouping different data of the same type, Java has a class, and a class is better in logically grouping data than a struct because it includes operations on the data as well.
If you want to format ELF, then you may have to look at the "The ELF Parser" section in http://www.icsa.inf.ed.ac.uk/research/groups/hase/manuals/design/javahase.html. See also LibElf and GElf - A Library to Manipulate ELf Files (an old article)

Unfortunatly there is no decent support to read binary structured data in java.
This example reads image header into a byte array and assembles the required information.

There's ByteBuffer.
Edit
This is just to answer how you might parse the ELF format, which seemed to be what the OP was actually asking for.
For example (I assume this is the same format, apologies if it's a completely different ELF format, either way, it shows the same process):
http://jumdbrowser.googlecode.com/svn-history/r3/trunk/UmdBrowser/src/jpcsp/format/Elf32.java

Edit: answer to the first question
Java classes

Related

How to parse freedict files (*.dict and *.index)

I was searching for free translation dictionaries. Freedict (freedict.org) provides the ones I need but I don't know, how to parse the *.index and *.dict files. I also don't really know, what to google, to find useful information about these formats.
The *.index files look following:
00databasealphabet QdGI l
00databasedictfmt1121 B b
00databaseinfo c 5o
00databaseshort 6E u
00databaseurl 6y c
00databaseutf8 A B
a BHO M
a bad risc BHa u
a bag of nerves BII 2
[...]
and the *.dict files:
[Lot of info stuff]
German-English FreeDict Dictionary ver. 0.3.4
Pipi machen /piːpiːmaxən/
to pee; to piss
(Aktien) zusammenlegen /aktsiːəntsuːzamənleːgən/
to merge (with)
[...]
I would be glad to see some example projects (preferably in python, but java, c, c++ are also ok) to understand how to handle these files.
It is too late. However, i hope that it can be useful for others like me.
JGoerzen writes a Dictdlib lib. You can see more details how he parse .index and .dict files.
https://github.com/jgoerzen/dictdlib/blob/master/dictdlib.py
dictd considers its format of .index and .dict[.dz] as private, to reserve itself the right to change it in the future.
If you want to process it directly anyway, the index contains the headwords and the .dict[.dz] contains definitions. It is optionally compressed with a special modified gzip algorithm providing almost random access, which gzip normally does not. The index contains 3 columns per line, tab separated:
The headword for looking up the definition.
The absolute byte position of the definition in the .dict[.dz] file, base64 encoded.
The length of the definition in bytes, base64 encoded.
For more details see the dict(8) man page (section Database Format) you should have found in your research before asking your question. For processing the headwords correctly, you'd have to consider encoding and character collation.
Eventually it would be better to use an existing library to read dictd databases. But that really depends on whether the library is good (no experience here).
Finally, as you noted yourself, XML is made exactly for easy processing. You could extract the headwords and translations using XPath, leaving out all the grammatical stuff and no need to bother parsing anything.
After getting this far the next problem would be that there is no one-to-one mapping between words in different lanuages...

Parsing Serialized Java objects in Python

The string at the bottom of this post is the serialization of a java.util.GregorianCalendar object in Java. I am hoping to parse it in Python.
I figured I could approach this problem with a combination of regexps and key=val splitting, i.e. something along the lines of:
text_inside_brackets = re.search(r"\[(.*)\]", text).group(1)
and
import parse
for x in [parse('{key} = {value}', x) for x in text_inside_brackets.split('=')]:
my_dict[x['key']] = x['value']
My question is: What would be a more principled / robust approach to do this? Are there any Python parsers for serialized Java objects that I could use for this problem? (do such things exist?). What other alternatives do I have?
My hope is to ultimately parse this in JSON or nested Python dictionaries, so that I can manipulate it it any way I want.
Note: I would prefer to avoid a solution relies on Py4J mostly because it requires setting up a server and a client, and I am hoping to do this within a single
Python script.
java.util.GregorianCalendar[time=1413172803113,areFieldsSet=true,areAllFieldsSet=true,lenient=true,zone=sun.util.calendar.ZoneInfo[id="America/New_York",offset=-18000000,dstSavings=3600000,useDaylight=true,transitions=235,lastRule=java.util.SimpleTimeZone[id=America/New_York,offset=-18000000,dstSavings=3600000,useDaylight=true,startYear=0,startMode=3,startMonth=2,startDay=8,startDayOfWeek=1,startTime=7200000,startTimeMode=0,endMode=3,endMonth=10,endDay=1,endDayOfWeek=1,endTime=7200000,endTimeMode=0]],firstDayOfWeek=1,minimalDaysInFirstWeek=1,ERA=1,YEAR=2014,MONTH=9,WEEK_OF_YEAR=42,WEEK_OF_MONTH=3,DAY_OF_MONTH=13,DAY_OF_YEAR=286,DAY_OF_WEEK=2,DAY_OF_WEEK_IN_MONTH=2,AM_PM=0,HOUR=0,HOUR_OF_DAY=0,MINUTE=0,SECOND=3,MILLISECOND=113,ZONE_OFFSET=-18000000,DST_OFFSET=3600000]
The serialized form of a GregorianCalendar object contains quite a lot of redundancy. In fact, there are only two fields that matter, if you want to reconstitute it:
the time
the timezone
There is code for extracting this in How to convert Gregorian string to Gregorian Calendar?
If you want a more principled and robust approach, I echo mbatchkarov's suggestion to use JSON.

Mapping java variables data to C Structures and write a c compatible file

I have a java class file with three arrayLists, one with type String, one with type Integer and other is ArrayList with type (ArrayList(String)). I have to write these these arraylists to a structure in C with character arrays, integers and short and output a file in a specefic format extension. The file has to be readable again by the same application. What is the best way to trasnfer the data from java to c structure and then output the c structure in a file. Thank you
There is no "C compatible file" format. If you have C structs written to disk file directly, then those are in an ad-hoc binary format. Exact format depends on things like packing and padding of the struct, byte order, word size of the CPU (like, 32 or 64 bit), etc.
So, start by defining the format, then forget it is produced by C.
Once you have the format defined, you can write a program to parse it in Java. If it is short with fixed length records, I'd probably create a class, which internally has just a private byte[] array, and then methods to manipulate it, save it and load it.
I suggest you write/read the data to a ByteBuffer using native byte ordering. The rest is up to you are to how you do it.
A library which might help is Javolution's Struct library which helps you map C structs onto ByteBuffers. This can help with C's various padding rules i.e.the exact layout might not be obvious.

How to convert java object into C struct

How I can convert Java Object into C struct? I know that I can translate the data with XML but I need more quick and easy way to do this? What are the possible solutions?
Data serialisation is the buzz word here.
For a quiet impressive list of techniques you might like to read here: http://en.wikipedia.org/wiki/Comparison_of_data_serialization_formats

Replicating C struct padding in Java

According to here, the C compiler will pad out values when writing a structure to a binary file. As the example in the link says, when writing a struct like this:
struct {
char c;
int i;
} a;
to a binary file, the compiler will usually leave an unnamed, unused hole between the char and int fields, to ensure that the int field is properly aligned.
How could I to create an exact replica of the binary output file (generated in C), using a different language (in my case, Java)?
Is there an automatic way to apply C padding in Java output? Or do I have to go through compiler documentation to see how it works (the compiler is g++ by the way).
Don't do this, it is brittle and will lead to alignment and endianness bugs.
For external data it is much better to explicitly define the format in terms of bytes and write explicit functions to convert between internal and external format, using shift and masks (not union!).
This is true not only when writing to files, but also in memory. It is the fact that the struct is padded in memory, that leads to the padding showing up in the file, if the struct is written out byte-by-byte.
It is in general very hard to replicate with certainty the exact padding scheme, although I guess some heuristics would get you quite far. It helps if you have the struct declaration, for analysis.
Typically, fields larger than one char will be aligned so that their starting offset inside the structure is a multiple of their size. This means shorts will generally be on even offsets (divisible by 2, assuming sizeof (short) == 2), while doubles will be on offsets divisible by 8, and so on.
UPDATE: It is for reasons like this (and also reasons having to do with endianness) that it is generally a bad idea to dump whole structs out to files. It's better to do it field-by-field, like so:
put_char(out, a.c);
put_int(out, a.i);
Assuming the put-functions only write the bytes needed for the value, this will emit a padding-less version of the struct to the file, solving the problem. It is also possible to ensure a proper, known, byte-ordering by writing these functions accordingly.
Is there an automatic way to apply C
padding in Java output? Or do I have
to go through compiler documentation
to see how it works (the compiler is
g++ by the way).
Neither. Instead, you explicitly specify a data/communication format and implement that specification, rather than relying on implementation details of the C compiler. You won't even get the same output from different C compilers.
For interoperability, look at the ByteBuffer class.
Essentially, you create a buffer of a certain size, put() variables of different types at different positions, and then call array() at the end to retrieve the "raw" data representation:
ByteBuffer bb = ByteBuffer.allocate(8);
bb.order(ByteOrder.LITTLE_ENDIAN);
bb.put(0, someChar);
bb.put(4, someInteger);
byte[] rawBytes = bb.array();
But it's up to you to work out where to put padding-- i.e. how many bytes to skip between positions.
For reading data written from C, then you generally wrap() a ByteBuffer around some byte array that you've read from a file.
In case it's helpful, I've written more on ByteBuffer.
A handy way of reading/writing C structs in Java is to use the javolution Struct class (see http://www.javolution.org). This won't help you with automatically padding/aligning your data, but it does make working with raw data held in a ByteBuffer much more convenient. If you're not familiar with javolution, it's well worth a look as there's lots of other cool stuff in there too.
This hole is configurable, compiler has switches to align structs by 1/2/4/8 bytes.
So the first question is: Which alignment exactly do you want to simulate?
With Java, the size of data types are defined by the language specification. For example, a byte type is 1 byte, short is 2 bytes, and so on. This is unlike C, where the size of each type is architecture-dependent.
Therefore, it would be important to know how the binary file is formatted in order to be able to read the file into Java.
It may be necessary to take steps in order to be certain that fields are a specific size, to account for differences in the compiler or architecture. The mention of alignment seem to suggest that the output file will depend on the architecture.
you could try preon:
Preon is a java library for building codecs for bitstream-compressed data in a
declarative (annotation based) way. Think JAXB or Hibernate, but then for binary
encoded data.
it can handle Big/Little endian binary data, alignment (padding) and various numeric types along other features. It is a very nice library, I like it very much
my 0.02$
I highly recommend protocol buffers for exactly this problem.
As I understand it, you're saying that you don't control the output of the C program. You have to take it as given.
So do you have to read this file for some specific set of structures, or do you have to solve this in a general case? I mean, is the problem that someone said, "Here's the file created by program X, you have to read it in Java"? Or do they expect your Java program to read the C source code, find the structure definition, and then read it in Java?
If you've got a specific file to read, the problem isn't really very difficult. Either by reviewing the C compiler specifications or by studying example files, figure out where the padding is. Then on the Java side, read the file as a stream of bytes, and build the values you know are coming. Basically I'd write a set of functions to read the required number of bytes from an InputStream and turn them into the appropriate data type. Like:
int readInt(InputStream is,int len)
throws PrematureEndOfDataException
{
int n=0;
while (len-->0)
{
int i=is.read();
if (i==-1)
throw new PrematureEndOfDataException();
byte b=(byte) i;
n=(n<<8)+b;
}
return n;
}
You can alter the packing on the c side to ensure that no padding is used, or alternatively you can look at the resultant file format in a hex editor to allow you to write a parser in Java that ignores bytes that are padding.

Categories

Resources