Retrieving value from objectdb database from program - java

I am facing some problems while I am trying to fetch data through the program. I am using objectDB as my database. Also, my database is already set up and I have dropped the laptop.odb file in the db folder of my objectDB installation. Also, when I go to the explorer and fire the query:
select this.modelName == "HP Pavillion"
correct results comes up. But, when I try to do the same thing with my code as in the following
public static void main(String argv[]) {
PersistenceManager pm = Utilities.getPersistenceManager("laptop.odb");
System.out.println("-- TEST --\n");
Query query = pm.newQuery(Laptop.class,"this.modelName == \"HP Pavillion\"");
Collection result = (Collection)query.execute();
System.out.println("Result is >> "+result);
Here no results are returned. My output is :
-- TEST find --
Result is >> []
My code for the class is the following.
package com.project;
import java.util.*;
import javax.annotation.processing.Processor;
import javax.jdo.*;
import com.objectdb.Utilities;
public class Laptop {
String modelName; // key
public static void main(String argv[]) {
PersistenceManager pm = Utilities.getPersistenceManager("laptop.odb");
System.out.println("-- TEST find --\n");
Query query = pm.newQuery(Laptop.class,"this.modelName == \"HP Pavillion\"");
Collection result = (Collection)query.execute();
System.out.println("Result is >> "+result);
}
Any suggestions ?

The reason could be that "laptop.odb" refers to a non existing ObjectDB database. In that case a new database is automatically created. Because the new database it is created empty, no results are returned from the query.
Try specifying an absolute path to the existing database.

Related

Unit test using HBaseTestingUtility

I am trying to debug the java code using HBaseTestingUtility library. I already have table created. I need to:
- Insert a value with a key in "myTable"
- Get the value from "myTable" with the key
- Verify the returned value is equal to the value I created
Here is the code that I filled out:
package HbaseUniteTest;
import jdk.nashorn.api.scripting.ScriptUtils;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.hbase.*;
import org.apache.hadoop.hbase.client.*;
import org.apache.hadoop.hbase.io.compress.Compression;
import org.apache.hadoop.hbase.util.Bytes;
import org.apache.hadoop.hbase.HTableDescriptor;
import org.junit.Assert;
import static org.junit.Assert.assertEquals;
public class TestCreateTableClass
{
private final static String tableName = "myTable";
private static ScriptUtils HTableUtil;
public static void main( String[] args ) throws Exception {
//Start the "mini cluster"
HBaseTestingUtility testingUtility = new HBaseTestingUtility();
testingUtility.startMiniCluster();
//Get the configuration
//Configuration conf = ...
Configuration conf = testingUtility.getConfiguration();
//Instantiate a connection
Connection connection = ConnectionFactory.createConnection(conf);
//Define table "myTable"
HTableDescriptor table = new HTableDescriptor(TableName.valueOf(tableName));
table.addFamily(new HColumnDescriptor("cf1").setCompressionType(Compression.Algorithm.NONE));
//Create table "myTable"
connection.getAdmin().createTable(table);
//Get the first (and only) table name
String first_table = connection.getAdmin().listTableNames()[0].getNameAsString();
//Verify the returned Table name is equal to the table name we provided
assertEquals(tableName,first_table);
//Insert a value with a key in "myTable"
byte[] key = Bytes.toBytes("some-key");
Put put = new Put(key);
put.add(Bytes.toBytes("colfam1"), Bytes.toBytes("qual1.1"), System.currentTimeMillis(), Bytes.toBytes("val1.1"));
put.add(Bytes.toBytes("colfam1"), Bytes.toBytes("qual1.2"), System.currentTimeMillis(), Bytes.toBytes("val1.2"));
put.add(Bytes.toBytes("colfam2"), Bytes.toBytes("qual2.1"), System.currentTimeMillis(), Bytes.toBytes("val2.1"));
Result converted = HTableUtil.convert(put);
table.put(put);
Result readFromTable = table.get(new Get(key));
Assert.assertArrayEquals(readFromTable.raw(), converted.raw());
//Get the value from "myTable" with the key
//Verify the returned value is equal to the value you created
//Stop the mini cluster
testingUtility.shutdownMiniCluster();
System.out.println("END OF TEST");
}
public static void setHTableUtil(ScriptUtils HTableUtil) {
TestCreateTableClass.HTableUtil = HTableUtil;
}
}
However, I got the following error:
1. The error at this line of code with the function put.add()
put.add(Bytes.toBytes("colfam1"), Bytes.toBytes("qual1.1"), System.currentTimeMillis(), Bytes.toBytes("val1.1"));
The 2nd error on this line of code:
Result converted = HTableUtil.convert(put);
Java cannot find symbol for these 3 methods put(), get(), raw()
table.put(put);
Result readFromTable = table.get(new Get(key));
Assert.assertArrayEquals(readFromTable.raw(), converted.raw());
I also notice some warnings regarding the class HTableDescriptor, HColumnDescriptor have been deprecated. I checked on internet and they advice to use for example "TableDescriptorBuilder" instead but I am not sure how to use it. (Ref: https://github.com/apache/hbase/blob/master/hbase-client/src/main/java/org/apache/hadoop/hbase/HTableDescriptor.java)
1. The error at this line of code with the function put.add().
I think you can use addColumn() like this for adding column.
put.addColumn(Bytes.toBytes("colfam1"), Bytes.toBytes("qual1.1"), System.currentTimeMillis(), Bytes.toBytes("val1.1"));
put.addColumn(Bytes.toBytes("colfam1"), Bytes.toBytes("qual1.2"), System.currentTimeMillis(), Bytes.toBytes("val1.2"));
put.addColumn(Bytes.toBytes("colfam2"), Bytes.toBytes("qual2.1"), System.currentTimeMillis(), Bytes.toBytes("val2.1"));
2. The 2nd error on this line of code:
I'm not familiar with 'ScriptUtils', But I think It works.
Result converted = (Result) HTableUtil.convert(put, Result.class);
3. Java cannot find symbol for these 3 methods put(), get(), raw()
It because you keep using 'HTableDescriptor' to put(), get(), or raw(). 'HTableDescriptor' is used to create table like DDL. You need to use Table class to manipulate using put(), get(), or raw().
Table createdTable = connection.getTable(TableName.valueOf(tableName));
createdTable.put(put);
Result readFromTable = createdTable.get(new Get(key));
Also, I believe class 'Result' doesn't provide raw(). So, you can compare both Results using Result.compareResults() like this.
Result.compareResults(readFromTable, converted);
4. How to use 'TableDescriptorBuilder'
Like I said above, 'Descriptor' is the class for defining your table, column family, column, and so on. So, you need to use it when you make/create them.
//Define table "myTable"
TableDescriptorBuilder table = TableDescriptorBuilder.newBuilder(TableName.valueOf(tableName));
table.setColumnFamily(ColumnFamilyDescriptorBuilder.newBuilder(Bytes.toBytes("cf1")).setCompressionType(Compression.Algorithm.NONE).build());
//Create table "myTable"
connection.getAdmin().createTable(table.build());

getNumRows() returns 0 when running SAP BAPI using JCo SAP

I am writing Java Code to get data from SAP BAPI using Java Connector (JCo). This is my first time to make a connection to SAP using JCo. I was able to get the Tables available in the Data Source and also get one particular Table and Number of Columns using table_name.getNumColumns() which gives me the total count of columns. But when I do, table_name.getNumRows(), it says 0. Where as in my Data source, there are around 85 Rows. How can I get the rows from this table?
The code I have been using:
public class SapConnection {
public static void gettingTableData(JCoFunction function) {
JCoParameterList table_list = function.getTableParameterList();
JCoTable my_table = function.getTableParameterList().getTable("SOME_TABLE");
System.out.println("Field Count: "+my_table.getFieldCount());
// This is not working as Number of Rows is 0.
for(int i = 0; i<my_table.getNumRows(); i++, my_table.nextRow()) {
// get those rows and do something ..
}
System.out.println("Is Empty: "+my_table.isEmpty()); // returns True
System.out.println("Is First Row: "+my_table.isFirstRow()); // returns false
System.out.println("Next Row: "+my_table.nextRow()); // returns false
System.out.println("Num Rows: "+my_table.getNumRows()); // returning 0
}
public static void loadDataSourceAndGetData(JCoDestination dest) throws JCoException {
JCoRepository sapRepository = dest.getRepository();
JCoFunctionTemplate template =
sapRepository.getFunctionTemplate("DATA_SOURCE_NAME");
JCoFunction my_function = template.getFunction();
gettingTableData(my_function);
}
public static void main(String[] args) throws JCoException {
// get the Properties created for connection.
Properties pp = getJcoProperties();
PropertiesDestinationDataProvider pddp = new PropertiesDestinationDataProvider(pp);
Environment.registerDestinationDataProvider(pddp);
JCoDestination dest = getDestination();
try {
// Using JCo Context for stateful function calls to Start() and End()
JCoContext.begin(dest);
loadDataSourceAndGetData(dest);
JCoRepository sapRepository = dest.getRepository();
System.out.println(sapRepository.getMonitor().getLastAccessTimestamp());
} finally {
// end the connection.
JCoContext.end(dest);
}
}
}
If you would like to get some data from a SAP BAPI it would help a lot also to call this BAPI. The data doesn't materialize automatically in the JCo objects out of thin air.
In your code you do not execute any JCoFunction.
Set the mandatory import parameter values for this BAPI (if there are any), execute the BAPI (your JCoFunction object) and then you will get the export data from the SAP system in response which will then also add appropriate rows to the JCoTable object.

Call transactional method Play Java JPA Hibernate

I have 2 database one is mysql and other is postgree.
I tried to get postgree data from mysql transactional method.
#Transactional(value = "pg")
public List<String> getSubordinate(){
Query q1 = JPA.em().createNativeQuery("select vrs.subordinate_number, vrs.superior_number\n" +
"from view_reporting_structure vrs\n" +
"where vrs.superior_number = :personel_number");
q1.setParameter("personel_number","524261");
List<String> me = q1.getResultList();
return me;
}
}
from another method
#Transactional
public Result getOpenRequestList(){
Subordinate subordinate = new Subordinate();
List<String> subordinateData = subordinate.getSubordinate();
....
}
i got error
com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Table 'db_hcm.view_reporting_structure' doesn't exist
so my Postgre method recognized as mySQL transaction which is the view not exist in mySQL database. how do I get data from different presistence unit with 1 method?
I never did it (different databases), but I guess the following may work.
For example, you have the following data source definition in application.conf:
# MySql
db.mysql.driver=com.mysql.jdbc.Driver
... the rest of setting for db.mysql
# H2
db.postgre.driver=org.postgresql.Driver
... the rest of setting for db.postgre
Instead of using #Transactional annotation, manage a transaction explicitly and use JPA withTransaction API:
private static final String MYSQL_DB = "mysql";
private static final String POSTGRE_DB = "postgre";
public List<String> getSubordinate() {
JPA.withTransaction(MYSQL_DB, true/* this is read-only flag*/,
() -> {
Query q1 = JPA.em().createNativeQuery("select vrs.subordinate_number, vrs.superior_number\n" +
"from view_reporting_structure vrs\n" +
"where vrs.superior_number = :personel_number");
q1.setParameter("personel_number","524261");
List<String> me = q1.getResultList();
return me;
}
}
public Result getOpenRequestList(){
JPA.withTransaction(POSTGRE_DB, true/* this is read-only flag*/,
() -> {
Subordinate subordinate = new Subordinate();
List<String> subordinateData = subordinate.getSubordinate();
....
}
}
Note: I prefer always use withTransaction, since it allows better control of unhappy flow. You should wrap the call with try-catch. If JPA throws a run-time exception on commit, you can do proper error handling. In case of using #Transactional annotation, commit takes place after controller have finished and you cannot handle the error.

Neo4j ExecutionEngine does not return valid results

Trying to use a similar example from the sample code found here
My sample function is:
void query()
{
String nodeResult = "";
String rows = "";
String resultString;
String columnsString;
System.out.println("In query");
// START SNIPPET: execute
ExecutionEngine engine = new ExecutionEngine( graphDb );
ExecutionResult result;
try ( Transaction ignored = graphDb.beginTx() )
{
result = engine.execute( "start n=node(*) where n.Name =~ '.*79.*' return n, n.Name" );
// END SNIPPET: execute
// START SNIPPET: items
Iterator<Node> n_column = result.columnAs( "n" );
for ( Node node : IteratorUtil.asIterable( n_column ) )
{
// note: we're grabbing the name property from the node,
// not from the n.name in this case.
nodeResult = node + ": " + node.getProperty( "Name" );
System.out.println("In for loop");
System.out.println(nodeResult);
}
// END SNIPPET: items
// START SNIPPET: columns
List<String> columns = result.columns();
// END SNIPPET: columns
// the result is now empty, get a new one
result = engine.execute( "start n=node(*) where n.Name =~ '.*79.*' return n, n.Name" );
// START SNIPPET: rows
for ( Map<String, Object> row : result )
{
for ( Entry<String, Object> column : row.entrySet() )
{
rows += column.getKey() + ": " + column.getValue() + "; ";
System.out.println("nested");
}
rows += "\n";
}
// END SNIPPET: rows
resultString = engine.execute( "start n=node(*) where n.Name =~ '.*79.*' return n.Name" ).dumpToString();
columnsString = columns.toString();
System.out.println(rows);
System.out.println(resultString);
System.out.println(columnsString);
System.out.println("leaving");
}
}
When I run this in the web console I get many results (as there are multiple nodes that have an attribute of Name that contains the pattern 79. Yet running this code returns no results. The debug print statements 'in loop' and 'nested' never print either. Thus this must mean there are not results found in the Iterator, yet that doesn't make sense.
And yes, I already checked and made sure that the graphDb variable is the same as the path for the web console. I have other code earlier that uses the same variable to write to the database.
EDIT - More info
If I place the contents of query in the same function that creates my data, I get the correct results. If I run the query by itself it returns nothing. It's almost as the query works only in the instance where I add the data and not if I come back to the database cold in a separate instance.
EDIT2 -
Here is a snippet of code that shows the bigger context of how it is being called and sharing the same DBHandle
package ContextEngine;
import ContextEngine.NeoHandle;
import java.util.LinkedList;
/*
* Class to handle streaming data from any coded source
*/
public class Streamer {
private NeoHandle myHandle;
private String contextType;
Streamer()
{
}
public void openStream(String contextType)
{
myHandle = new NeoHandle();
myHandle.createDb();
}
public void streamInput(String dataLine)
{
Context context = new Context();
/*
* get database instance
* write to database
* check for errors
* report errors & success
*/
System.out.println(dataLine);
//apply rules to data (make ContextRules do this, send type and string of data)
ContextRules contextRules = new ContextRules();
context = contextRules.processContextRules("Calls", dataLine);
//write data (using linked list from contextRules)
NeoProcessor processor = new NeoProcessor(myHandle);
processor.processContextData(context);
}
public void runQuery()
{
NeoProcessor processor = new NeoProcessor(myHandle);
processor.query();
}
public void closeStream()
{
/*
* close database instance
*/
myHandle.shutDown();
}
}
Now, if I call streamInput AND query in in the same instance (parent calls) the query returns results. If I only call query and do not enter ANY data in that instance (yet web console shows data for same query) I get nothing. Why would I have to create the Nodes and enter them into the database at runtime just to return a valid query. Shouldn't I ALWAYS get the same results with such a query?
You mention that you are using the Neo4j Browser, which comes with Neo4j. However, the example you posted is for Neo4j Embedded, which is the in-process version of Neo4j. Are you sure you are talking to the same database when you try your query in the Browser?
In order to talk to Neo4j Server from Java, I'd recommend looking at the Neo4j JDBC driver, which has good support for connecting to the Neo4j server from Java.
http://www.neo4j.org/develop/tools/jdbc
You can set up a simple connection by adding the Neo4j JDBC jar to your classpath, available here: https://github.com/neo4j-contrib/neo4j-jdbc/releases Then just use Neo4j as any JDBC driver:
Connection conn = DriverManager.getConnection("jdbc:neo4j://localhost:7474/");
ResultSet rs = conn.executeQuery("start n=node({id}) return id(n) as id", map("id", id));
while(rs.next()) {
System.out.println(rs.getLong("id"));
}
Refer to the JDBC documentation for more advanced usage.
To answer your question on why the data is not durably stored, it may be one of many reasons. I would attempt to incrementally scale back the complexity of the code to try and locate the culprit. For instance, until you've found your problem, do these one at a time:
Instead of looping through the result, print it using System.out.println(result.dumpToString());
Instead of the regex query, try just MATCH (n) RETURN n, to return all data in the database
Make sure the data you are seeing in the browser is not "old" data inserted earlier on, but really is an insert from your latest run of the Java program. You can verify this by deleting the data via the browser before running the Java program using MATCH (n) OPTIONAL MATCH (n)-[r]->() DELETE n,r;
Make sure you are actually working against the same database directories. You can verify this by leaving the server running. If you can still start your java program, unless your Java program is using the Neo4j REST Bindings, you are not using the same directory. Two Neo4j databases cannot run against the same database directory simultaneously.

NoSuchMethod when trying to create a SPARQL query with jena

I am trying to make some SPARQL queries using vc-db-1.rdf and q1.rq from ARQ examples. Here is my java code:
import com.hp.hpl.jena.rdf.model.*;
import com.hp.hpl.jena.util.FileManager;
import com.hp.hpl.jena.query.* ;
import com.hp.hpl.jena.query.ARQ;
import com.hp.hpl.jena.iri.*;
import java.io.*;
public class querier extends Object
{
static final String inputFileName = "vc-db-1.rdf";
public static void main (String args[])
{
// Create an empty in-memory model
Model model = ModelFactory.createDefaultModel();
// use the FileManager to open the bloggers RDF graph from the filesystem
InputStream in = FileManager.get().open(inputFileName);
if (in == null)
{
throw new IllegalArgumentException( "File: " + inputFileName + " not found");
}
// read the RDF/XML file
model.read( in, "");
// Create a new query
String queryString = "PREFIX vcard: <http://www.w3.org/2001/vcard-rdf/3.0#> SELECT ?y ?givenName WHERE { ?y vcard:Family \"Smith\" . ?y vcard:Given ?givenName . }";
QueryFactory.create(queryString);
}
}
Compilation passes just fine.
The problem is that the query is not even executed, but I am getting an error during creating it at line
QueryFactory.create(queryString);
with the following explanation:
C:\Wallet\projects\java\ARQ_queries>java querier
Exception in thread "main" java.lang.NoSuchMethodError: com.hp.hpl.jena.iri.IRI.
resolve(Ljava/lang/String;)Lcom/hp/hpl/jena/iri/IRI;
at com.hp.hpl.jena.n3.IRIResolver.resolveGlobal(IRIResolver.java:191)
at com.hp.hpl.jena.sparql.mgt.SystemInfo.createIRI(SystemInfo.java:31)
at com.hp.hpl.jena.sparql.mgt.SystemInfo.<init>(SystemInfo.java:23)
at com.hp.hpl.jena.query.ARQ.init(ARQ.java:373)
at com.hp.hpl.jena.query.ARQ.<clinit>(ARQ.java:385)
at com.hp.hpl.jena.query.Query.<clinit>(Query.java:53)
at com.hp.hpl.jena.query.QueryFactory.create(QueryFactory.java:68)
at com.hp.hpl.jena.query.QueryFactory.create(QueryFactory.java:40)
at com.hp.hpl.jena.query.QueryFactory.create(QueryFactory.java:28)
at querier.main(querier.java:24)
How can i solve this? Thank you.
It looks like you're missing the IRI library on the classpath (the IRI library is separate from the main Jena JAR). Jena has runtime dependencies on several other libraries which are included in the lib directory of the Jena distribution. All of these need to be on your classpath at runtime (but not necessarily at compile time).

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