Develop Reference

Run Geoserver platform independent binary over https?

I am new to work on Geoserver,now i have a requirement to run geoserver over https. I had followed some steps to configure jetty for https but it didn't work,i might have went wrong somewhere.
java.lang.IllegalStateException: No constructor class org.eclipse.jetty.server.ServerConnector([],{}) in file:/C:/Users/sanja/Downloads/geoserver-2.17.1-bin/etc/jetty-https.xml
at org.eclipse.jetty.xml.XmlConfiguration$JettyXmlConfiguration.configure(XmlConfiguration.java:406)
at org.eclipse.jetty.xml.XmlConfiguration.configure(XmlConfiguration.java:311)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1558)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1512)
at java.security.AccessController.doPrivileged(Native Method)
at org.eclipse.jetty.xml.XmlConfiguration.main(XmlConfiguration.java:1511)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.jetty.start.Main.invokeMain(Main.java:220)
at org.eclipse.jetty.start.Main.start(Main.java:490)
at org.eclipse.jetty.start.Main.main(Main.java:77)
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.jetty.start.Main.invokeMain(Main.java:220)
at org.eclipse.jetty.start.Main.start(Main.java:490)
at org.eclipse.jetty.start.Main.main(Main.java:77)
Caused by: java.lang.IllegalStateException: No constructor class org.eclipse.jetty.server.ServerConnector([],{}) in file:/C:/Users/sanja/Downloads/geoserver-2.17.1-bin/etc/jetty-https.xml
at org.eclipse.jetty.xml.XmlConfiguration$JettyXmlConfiguration.configure(XmlConfiguration.java:406)
at org.eclipse.jetty.xml.XmlConfiguration.configure(XmlConfiguration.java:311)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1558)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1512)
at java.security.AccessController.doPrivileged(Native Method)
at org.eclipse.jetty.xml.XmlConfiguration.main(XmlConfiguration.java:1511)
... 7 more
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.jetty.start.Main.invokeMain(Main.java:220)
at org.eclipse.jetty.start.Main.start(Main.java:490)
at org.eclipse.jetty.start.Main.main(Main.java:77)
Caused by: java.lang.IllegalStateException: No constructor class org.eclipse.jetty.server.ServerConnector([],{}) in file:/C:/Users/sanja/Downloads/geoserver-2.17.1-bin/etc/jetty-https.xml
at org.eclipse.jetty.xml.XmlConfiguration$JettyXmlConfiguration.configure(XmlConfiguration.java:406)
at org.eclipse.jetty.xml.XmlConfiguration.configure(XmlConfiguration.java:311)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1558)
at org.eclipse.jetty.xml.XmlConfiguration$1.run(XmlConfiguration.java:1512)
at java.security.AccessController.doPrivileged(Native Method)
at org.eclipse.jetty.xml.XmlConfiguration.main(XmlConfiguration.java:1511)
... 7 more
These are the errors(ref image).
I am not so good in java too.

Don't run the platform independent binary in production!
If you still need to add HTTPS support then you need to follow the Eclipse instructions to add HTTPS to Jetty.
Without knowing how far you got along that path it's impossible to give any further advice.

java.lang.ClassNotFoundException: org.apache.pdfbox.exceptions.COSVisitorException

My project were working quite fine before I had to reinstall my operating system, now it gives me this huge exception:
SEVERE: ContainerBase.addChild: start:
org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[/HibernateDataSource]]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:162)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:899)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.manageApp(HostConfig.java:1863)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:301)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:618)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:565)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:301)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at javax.management.remote.rmi.RMIConnectionImpl.doOperation(RMIConnectionImpl.java:1468)
at javax.management.remote.rmi.RMIConnectionImpl.access$300(RMIConnectionImpl.java:76)
at javax.management.remote.rmi.RMIConnectionImpl$PrivilegedOperation.run(RMIConnectionImpl.java:1309)
at javax.management.remote.rmi.RMIConnectionImpl.doPrivilegedOperation(RMIConnectionImpl.java:1401)
at javax.management.remote.rmi.RMIConnectionImpl.invoke(RMIConnectionImpl.java:829)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:357)
at sun.rmi.transport.Transport$1.run(Transport.java:200)
at sun.rmi.transport.Transport$1.run(Transport.java:197)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:196)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:568)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:826)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.lambda$run$0(TCPTransport.java:683)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:682)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.NoClassDefFoundError: org/apache/pdfbox/exceptions/COSVisitorException
at java.lang.Class.getDeclaredFields0(Native Method)
at java.lang.Class.privateGetDeclaredFields(Class.java:2583)
at java.lang.Class.getDeclaredFields(Class.java:1916)
at org.apache.catalina.util.Introspection.getDeclaredFields(Introspection.java:106)
at org.apache.catalina.startup.WebAnnotationSet.loadFieldsAnnotation(WebAnnotationSet.java:270)
at org.apache.catalina.startup.WebAnnotationSet.loadApplicationServletAnnotations(WebAnnotationSet.java:139)
at org.apache.catalina.startup.WebAnnotationSet.loadApplicationAnnotations(WebAnnotationSet.java:65)
at org.apache.catalina.startup.ContextConfig.applicationAnnotationsConfig(ContextConfig.java:417)
at org.apache.catalina.startup.ContextConfig.configureStart(ContextConfig.java:891)
at org.apache.catalina.startup.ContextConfig.lifecycleEvent(ContextConfig.java:388)
at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:117)
at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:90)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5522)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145)
... 42 more
Caused by: java.lang.ClassNotFoundException: org.apache.pdfbox.exceptions.COSVisitorException
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1892)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1735)
... 56 more
set 16, 2017 1:43:31 PM org.apache.tomcat.util.modeler.BaseModelMBean invoke
SEVERE: Exception invoking method manageApp
java.lang.IllegalStateException: ContainerBase.addChild: start: org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[/HibernateDataSource]]
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:903)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:875)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:652)
at org.apache.catalina.startup.HostConfig.manageApp(HostConfig.java:1863)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:301)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:618)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:565)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:301)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at javax.management.remote.rmi.RMIConnectionImpl.doOperation(RMIConnectionImpl.java:1468)
at javax.management.remote.rmi.RMIConnectionImpl.access$300(RMIConnectionImpl.java:76)
at javax.management.remote.rmi.RMIConnectionImpl$PrivilegedOperation.run(RMIConnectionImpl.java:1309)
at javax.management.remote.rmi.RMIConnectionImpl.doPrivilegedOperation(RMIConnectionImpl.java:1401)
at javax.management.remote.rmi.RMIConnectionImpl.invoke(RMIConnectionImpl.java:829)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:357)
at sun.rmi.transport.Transport$1.run(Transport.java:200)
at sun.rmi.transport.Transport$1.run(Transport.java:197)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:196)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:568)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:826)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.lambda$run$0(TCPTransport.java:683)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:682)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
I have used Eclipse before, and then IntelliJ, but got the same problem...
I am using Java 8 and Apache tomcat 7.0.73.
There was a time it started correctly, but I was not able to access it in the browser the same way that I used before facing this problem (actually I wasn't able to access anyway).

Usually NoClassDefFoundError tells you that you didn't include jar file with necessary class. In your case this is COSVisitorException. Here you have two options.
Add maven dependency to your project:
<dependency>
<groupId>org.apache.pdfbox</groupId>
<artifactId>pdfbox</artifactId>
<version><!--specify version which you are using --></version>
</dependency>
Or download your version of pdfbox-***.jar from maven repository and add to you %TOMCAT_HOME%/lib directory

I realized that the error was actually duo a class which were not being found (that was the reason I was receiving an NoClassDefFoundError), so I updated my pdfbox maven dependency to version 2.0.7. Doing this I still got the same error, then I just found out where the unmet classes were, and IntelliJ by itself suggested the right classes, I think that I needed to do it maybe because it has changed after an update or I don't know how it got to this point. I believe that somehow, Eclipse used to run it in a way that it could run even with compiler errors, but IntelliJ required me to fix such errors.

OIM Custom ICF based connector throwing runtime exception

I have created one ICF based Flat file connector which uses REST web service to Read/write the data from file. I have used jersey implementation 1.6 to write the web service and the java client which will call that web service.
I am using stand alone java code for testing the CRUD functionality.It's giving exception at first line where I am initializing the jersey Client.
Client flatFileRestClient = Client.create();
I got to know that the error is because the connector server is not able to recognize the jersey implementation jars.So as per documentation of ICF connector i had put the jersey bundle jar in connector server/lib folder. I had restarted the connector server and invoke create operation but issue still exists.
I had also added the class path of custom jar in ConnectorServer.bat
file located in CONNECTOR_SERVER_HOME/bin. Still the issue persists.
Please find full stack trace of the exception thrown on eclipse console:
java.lang.RuntimeException: javax/ws/rs/ext/Providers
at org.identityconnectors.framework.impl.serializer.CommonObjectHandlers$17.createException(CommonObjectHandlers.java:301)
at org.identityconnectors.framework.impl.serializer.CommonObjectHandlers$ThrowableHandler.deserialize(CommonObjectHandlers.java:115)
at org.identityconnectors.framework.impl.serializer.binary.BinaryObjectDecoder$InternalDecoder.readObject(BinaryObjectDecoder.java:162)
at org.identityconnectors.framework.impl.serializer.binary.BinaryObjectDecoder.readObject(BinaryObjectDecoder.java:313)
at org.identityconnectors.framework.impl.serializer.binary.BinaryObjectDecoder.readObjectField(BinaryObjectDecoder.java:417)
at org.identityconnectors.framework.impl.serializer.MessageHandlers$5.deserialize(MessageHandlers.java:155)
at org.identityconnectors.framework.impl.serializer.binary.BinaryObjectDecoder$InternalDecoder.readObject(BinaryObjectDecoder.java:162)
at org.identityconnectors.framework.impl.serializer.binary.BinaryObjectDecoder.readObject(BinaryObjectDecoder.java:313)
at org.identityconnectors.framework.impl.api.remote.RemoteFrameworkConnection.readObject(RemoteFrameworkConnection.java:153)
at org.identityconnectors.framework.impl.api.remote.RemoteOperationInvocationHandler.invoke(RemoteOperationInvocationHandler.java:101)
at com.sun.proxy.$Proxy0.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.DelegatingTimeoutProxy.invoke(DelegatingTimeoutProxy.java:107)
at com.sun.proxy.$Proxy0.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.LoggingProxy.invoke(LoggingProxy.java:76)
at com.sun.proxy.$Proxy0.create(Unknown Source)
at org.identityconnectors.framework.impl.api.AbstractConnectorFacade.create(AbstractConnectorFacade.java:123)
at org.identityconnectors.flatfileconnector.test.TestOperations.create(TestOperations.java:37)
at org.identityconnectors.flatfileconnector.test.TestOperations.main(TestOperations.java:44)
Please below exceptions thrown on connector server:
Jun 06, 2016 5:19:13 PM org.identityconnectors.framework.server.impl.ConnectionL
istener processOperationRequest
SEVERE: javax/ws/rs/ext/Providers
java.lang.NoClassDefFoundError: javax/ws/rs/ext/Providers
at org.identityconnectors.flatfileconnector.restclient.FlatFileRestClient.<
init>(FlatFileRestClient.java:18)
at org.identityconnectors.flatfileconnector.FlatFileConnector.create(FlatFileConnector.java:85)
at org.identityconnectors.framework.impl.api.local.operations.CreateImpl
.create(CreateImpl.java:80)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
sorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.local.operations.ConnectorA
PIOperationRunnerProxy.invoke(ConnectorAPIOperationRunnerProxy.java:93)
at com.sun.proxy.$Proxy3.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
sorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.local.operations.ThreadClas
sLoaderManagerProxy.invoke(ThreadClassLoaderManagerProxy.java:107)
at com.sun.proxy.$Proxy3.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
sorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.DelegatingTimeoutProxy.invo
ke(DelegatingTimeoutProxy.java:107)
at com.sun.proxy.$Proxy3.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
sorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.impl.api.LoggingProxy.invoke(Logging
Proxy.java:76)
at com.sun.proxy.$Proxy3.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
sorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.identityconnectors.framework.server.impl.ConnectionProcessor.proc
essOperationRequest(ConnectionProcessor.java:287)
at org.identityconnectors.framework.server.impl.ConnectionProcessor.proc
essRequest(ConnectionProcessor.java:191)
at org.identityconnectors.framework.server.impl.ConnectionProcessor.run(
ConnectionProcessor.java:121)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.
java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor
.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.ClassNotFoundException: javax.ws.rs.ext.Providers
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
... 37 more
Any help at the earliest would appreciate.

The problem was due to the REST API jars which i was using. I have de-compile the jersey-bundle-1.6.jar and found the javax.ws.rs.ext.Providers.class is not present in that jar. So i have downloaded the Java 6 complied version of the Jersey-bundler-1.16.jar

Problems with deploying an exploded WAR to a Tomcat 6 server in IntelliJ Idea 12.1.4 Ultimate

I'm trying to debug a web app in IntelliJ Idea, which is deployed to a local Tomcat 6 server in form of an exploded WAR.
At the start of the application I get ClassNotFoundExceptions, even though the exploded WAR directory contains those classes (in its WEB-INF/classe subdirectory).
When I launch the web app in IntelliJ Idea (press the Debug 'Tomcat' button) and look into the Tomcat webapp directory (C:\Program Files\Apache Software Foundation\Tomcat 6.0\webapps), I don't see there a directory with my exploded WAR.
Therefore, I think that the exploded WAR is not copied to the respective Tomcat directory.
How can I fix this (make sure that Tomcat sees all class files from my exploded WAR directory) ?
Update 1 (18.09.2013 13:46 MSK):
Here's the stack trace:
org.apache.tomcat.util.modeler.BaseModelMBean invoke
SEVERE: Exception invoking method manageApp
java.lang.NoClassDefFoundError: ru/mycompany/MyClass
at ru.mycompany.MyCustomRealm.start(Unknown Source)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4594)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601)
at org.apache.catalina.startup.HostConfig.manageApp(HostConfig.java:1429)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:297)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:631)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:568)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:295)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at javax.management.remote.rmi.RMIConnectionImpl.doOperation(RMIConnectionImpl.java:1487)
at javax.management.remote.rmi.RMIConnectionImpl.access$300(RMIConnectionImpl.java:97)
at javax.management.remote.rmi.RMIConnectionImpl$PrivilegedOperation.run(RMIConnectionImpl.java:1328)
at javax.management.remote.rmi.RMIConnectionImpl.doPrivilegedOperation(RMIConnectionImpl.java:1420)
at javax.management.remote.rmi.RMIConnectionImpl.invoke(RMIConnectionImpl.java:848)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:322)
at sun.rmi.transport.Transport$1.run(Transport.java:177)
at sun.rmi.transport.Transport$1.run(Transport.java:174)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:173)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:553)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:808)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:667)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:724)
Caused by: java.lang.ClassNotFoundException: ru.mycompany.MyClass
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 42 more
сен 18, 2013 1:38:26 PM org.apache.tomcat.util.modeler.BaseModelMBean invoke
SEVERE: Exception invoking method createStandardContext
javax.management.RuntimeErrorException: Error invoking method manageApp
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:308)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:631)
at org.apache.catalina.mbeans.MBeanFactory.createStandardContext(MBeanFactory.java:568)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:295)
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.invoke(DefaultMBeanServerInterceptor.java:819)
at com.sun.jmx.mbeanserver.JmxMBeanServer.invoke(JmxMBeanServer.java:801)
at javax.management.remote.rmi.RMIConnectionImpl.doOperation(RMIConnectionImpl.java:1487)
at javax.management.remote.rmi.RMIConnectionImpl.access$300(RMIConnectionImpl.java:97)
at javax.management.remote.rmi.RMIConnectionImpl$PrivilegedOperation.run(RMIConnectionImpl.java:1328)
at javax.management.remote.rmi.RMIConnectionImpl.doPrivilegedOperation(RMIConnectionImpl.java:1420)
at javax.management.remote.rmi.RMIConnectionImpl.invoke(RMIConnectionImpl.java:848)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:322)
at sun.rmi.transport.Transport$1.run(Transport.java:177)
at sun.rmi.transport.Transport$1.run(Transport.java:174)
at java.security.AccessController.doPrivileged(Native Method)
at sun.rmi.transport.Transport.serviceCall(Transport.java:173)
at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:553)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:808)
at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:667)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:724)
Caused by: java.lang.NoClassDefFoundError: ru/mycompany/MyClass
at ru.mycompany.MyCustomRealm.start(Unknown Source)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4594)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601)
at org.apache.catalina.startup.HostConfig.manageApp(HostConfig.java:1429)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.tomcat.util.modeler.BaseModelMBean.invoke(BaseModelMBean.java:297)
... 31 more
Caused by: java.lang.ClassNotFoundException: ru.mycompany.MyClass
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 42 more

I have a similar app which happens to be a maven project, and by default it uses the target (output) directory. However this can be verified by:
Look for the following line in the startup log Using CATALINA_BASE: "C:\Users\xxxxx\.IntelliJIdea12\system\tomcat\Unnamed_bpt_5"
Go into the directory specified in the log message, then into conf\Catalina\localhost
Open the xml from the folder and check the docBase
Also, please ensure that on the Run/Debug configuration page in the Before launch section you have added Make (or maven package) goal so it will compile your classes and resources

Saving JPG-Image with JAI's filestore under linux

I am trying to solve a homework, in which I should implement a Pipes&Filters-Architecture for a image processing task. But I have problems with the JAI-Framework under Linux (ArchLinux, to be specific).
I am loading a Image with fileload:
_image = JAI.create("fileload", file);
Later I want to save the image into a separate location:
JAI.create("filestore", _image, _filename, "JPEG");
I just copied the relevant lines, this is my whole JAI-specific code until now. But when I execute my program I get the following error:
Error: One factory fails for the operation "jpeg"
Occurs in: javax.media.jai.ThreadSafeOperationRegistry
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.StreamRIF.create(StreamRIF.java:102)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.FileLoadRIF.create(FileLoadRIF.java:144)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:819)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:799)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.JAI.createNS(JAI.java:1099)
at javax.media.jai.JAI.create(JAI.java:973)
at javax.media.jai.JAI.create(JAI.java:1621)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.storeFile(ImageSink.java:37)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:58)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:16)
at at.fhv.students.rotter.systemarchitectures.pipesfilters.Pipe.write(Pipe.java:70)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.write(ImageSource.java:77)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.run(ImageSource.java:84)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.Program.main(Program.java:29)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:120)
Caused by: java.lang.NoClassDefFoundError: com/sun/image/codec/jpeg/ImageFormatException
at com.sun.media.jai.codecimpl.JPEGImageDecoder.decodeAsRenderedImage(JPEGImageDecoder.java:46)
at com.sun.media.jai.opimage.CodecRIFUtil.create(CodecRIFUtil.java:88)
at com.sun.media.jai.opimage.JPEGRIF.create(JPEGRIF.java:43)
... 47 more
Caused by: java.lang.ClassNotFoundException: com.sun.image.codec.jpeg.ImageFormatException
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
... 50 more
Error: One factory fails for the operation "stream"
Occurs in: javax.media.jai.ThreadSafeOperationRegistry
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.FileLoadRIF.create(FileLoadRIF.java:144)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:819)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:799)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.JAI.createNS(JAI.java:1099)
at javax.media.jai.JAI.create(JAI.java:973)
at javax.media.jai.JAI.create(JAI.java:1621)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.storeFile(ImageSink.java:37)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:58)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:16)
at at.fhv.students.rotter.systemarchitectures.pipesfilters.Pipe.write(Pipe.java:70)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.write(ImageSource.java:77)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.run(ImageSource.java:84)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.Program.main(Program.java:29)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:120)
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "jpeg"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.StreamRIF.create(StreamRIF.java:102)
... 38 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 41 more
Caused by: java.lang.NoClassDefFoundError: com/sun/image/codec/jpeg/ImageFormatException
at com.sun.media.jai.codecimpl.JPEGImageDecoder.decodeAsRenderedImage(JPEGImageDecoder.java:46)
at com.sun.media.jai.opimage.CodecRIFUtil.create(CodecRIFUtil.java:88)
at com.sun.media.jai.opimage.JPEGRIF.create(JPEGRIF.java:43)
... 47 more
Caused by: java.lang.ClassNotFoundException: com.sun.image.codec.jpeg.ImageFormatException
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
... 50 more
Error: One factory fails for the operation "fileload"
Occurs in: javax.media.jai.ThreadSafeOperationRegistry
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:819)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:799)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.JAI.createNS(JAI.java:1099)
at javax.media.jai.JAI.create(JAI.java:973)
at javax.media.jai.JAI.create(JAI.java:1621)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.storeFile(ImageSink.java:37)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:58)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:16)
at at.fhv.students.rotter.systemarchitectures.pipesfilters.Pipe.write(Pipe.java:70)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.write(ImageSource.java:77)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.run(ImageSource.java:84)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.Program.main(Program.java:29)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:120)
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "stream"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.FileLoadRIF.create(FileLoadRIF.java:144)
... 29 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 32 more
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "jpeg"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.StreamRIF.create(StreamRIF.java:102)
... 38 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 41 more
Caused by: java.lang.NoClassDefFoundError: com/sun/image/codec/jpeg/ImageFormatException
at com.sun.media.jai.codecimpl.JPEGImageDecoder.decodeAsRenderedImage(JPEGImageDecoder.java:46)
at com.sun.media.jai.opimage.CodecRIFUtil.create(CodecRIFUtil.java:88)
at com.sun.media.jai.opimage.JPEGRIF.create(JPEGRIF.java:43)
... 47 more
Caused by: java.lang.ClassNotFoundException: com.sun.image.codec.jpeg.ImageFormatException
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
... 50 more
Exception in thread "main" javax.media.jai.util.ImagingException: All factories fail for the operation "fileload"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:819)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:799)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.JAI.createNS(JAI.java:1099)
at javax.media.jai.JAI.create(JAI.java:973)
at javax.media.jai.JAI.create(JAI.java:1621)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.storeFile(ImageSink.java:37)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:58)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:16)
at at.fhv.students.rotter.systemarchitectures.pipesfilters.Pipe.write(Pipe.java:70)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.write(ImageSource.java:77)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.run(ImageSource.java:84)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.Program.main(Program.java:29)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:120)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 23 more
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "stream"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.FileLoadRIF.create(FileLoadRIF.java:144)
... 29 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 32 more
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "jpeg"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.StreamRIF.create(StreamRIF.java:102)
... 38 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 41 more
Caused by: java.lang.NoClassDefFoundError: com/sun/image/codec/jpeg/ImageFormatException
at com.sun.media.jai.codecimpl.JPEGImageDecoder.decodeAsRenderedImage(JPEGImageDecoder.java:46)
at com.sun.media.jai.opimage.CodecRIFUtil.create(CodecRIFUtil.java:88)
at com.sun.media.jai.opimage.JPEGRIF.create(JPEGRIF.java:43)
... 47 more
Caused by: java.lang.ClassNotFoundException: com.sun.image.codec.jpeg.ImageFormatException
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
... 50 more
Caused by:
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:819)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.RenderedOp.createInstance(RenderedOp.java:799)
at javax.media.jai.RenderedOp.createRendering(RenderedOp.java:867)
at javax.media.jai.RenderedOp.getRendering(RenderedOp.java:888)
at javax.media.jai.JAI.createNS(JAI.java:1099)
at javax.media.jai.JAI.create(JAI.java:973)
at javax.media.jai.JAI.create(JAI.java:1621)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.storeFile(ImageSink.java:37)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:58)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSink.write(ImageSink.java:16)
at at.fhv.students.rotter.systemarchitectures.pipesfilters.Pipe.write(Pipe.java:70)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.write(ImageSource.java:77)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.ImageSource.run(ImageSource.java:84)
at at.fhv.students.rotter.systemarchitectures.imageprocessing.Program.main(Program.java:29)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:120)
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "stream"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.FileLoadRIF.create(FileLoadRIF.java:144)
... 29 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 32 more
Caused by: javax.media.jai.util.ImagingException: All factories fail for the operation "jpeg"
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1687)
at javax.media.jai.ThreadSafeOperationRegistry.invokeFactory(ThreadSafeOperationRegistry.java:473)
at javax.media.jai.registry.RIFRegistry.create(RIFRegistry.java:332)
at com.sun.media.jai.opimage.StreamRIF.create(StreamRIF.java:102)
... 38 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at javax.media.jai.FactoryCache.invoke(FactoryCache.java:122)
at javax.media.jai.OperationRegistry.invokeFactory(OperationRegistry.java:1674)
... 41 more
Caused by: java.lang.NoClassDefFoundError: com/sun/image/codec/jpeg/ImageFormatException
at com.sun.media.jai.codecimpl.JPEGImageDecoder.decodeAsRenderedImage(JPEGImageDecoder.java:46)
at com.sun.media.jai.opimage.CodecRIFUtil.create(CodecRIFUtil.java:88)
at com.sun.media.jai.opimage.JPEGRIF.create(JPEGRIF.java:43)
... 47 more
Caused by: java.lang.ClassNotFoundException: com.sun.image.codec.jpeg.ImageFormatException
at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
... 50 more
Does anybody have an idea?
UPDATE:
I have already tested a bit, and found out that the loading of bmp-Images works sometimes. Then I tried to show the image in a DisplayJAI, instead of writing it into a file. This works for the following bmp-Image:
http://i.stack.imgur.com/dDILk.png
But it does not work for the following image (which I converted to a bmp from a jpg with gimp):
http://i.stack.imgur.com/xQWQa.png

I have spent the day searching for answers on this issue. The important thing with JAI is the version of the Java JDK that you use. OpenJDK does not work with it. You need the Oracle Java JDK.
Instructions on getting and installing this are here: https://askubuntu.com/questions/56104/how-can-i-install-sun-oracles-proprietary-java-jdk-6-7-8-or-jre
Or, for those with Ubuntu, here are the quick instrcutions:
sudo apt-get install python-software-properties
sudo add-apt-repository ppa:webupd8team/java
sudo apt-get update
sudo apt-get install oracle-java7-installer
Hope this helps. Maybe this will save you time when you hit this error

Finally I found the solution: I also had to add the mlibwrapper.jar-File from the ext-folder to the project...