How to pass an argument to the main program in Hadoop - java

Each time I run my Hadoop program I need to change the number of mappers and reducers. Is there any way to pass the number of mappers and reducers to my program from command line (when I run the program) and then used args to retrieve it?

It is important to understand that you cannot really specify the number of map tasks. Ultimately the number of map tasks is defined as the number of input splits which is dependent on your InputFormat implementation. Let's say you have 1TB of input data, and your HDFS block size is 64MB, so Hadoop will compute around 16k map tasks, and from there if you specify a manual value less than 16k it will be ignored, but more than 16k and it will be used.
To pass via command-line, the easiest way is to use the built-in class GenericOptionsParser (described here) which will directly parse common command-line Hadoop-related arguments like what you are trying to do. The good thing is that it allows you to pass pretty much any Hadoop parameters you want without having to write extra code later. You would do something like this:
public static void main(String[] args) {
Configuration conf = new Configuration();
String extraArgs[] = new GenericOptionsParser(conf, args).getRemainingArgs();
// do something with your non-Hadoop parameters if needed
}
Now the properties you need to define to modify the number of mappers and reducers are respectively mapred.map.tasks and mapred.reduce.tasks, so you can just run your job with these parameters:
-D mapred.map.tasks=42 -D mapred.reduce.tasks
and they will get directly parsed with your GenericOptionParser and populate your Configuration object automatically. Note that there is a space between the -D and the properties, this is important otherwise this will be interpreted as JVM parameters.
Here is a good link if you want to know more about this.

You can specify the number of mappers and reducers ( and really any parameter you can specify in the config), by using the -D parameter. This works for all default Hadoop jars and your own jars as long as you extends Configured.
hadoop jar myJar.jar -Dmapreduce.job.maps=<Number of maps> -Dmapreduce.job.reduces=<Number of reducers>
From there you can retreive the values using.
configuration.get("mapreduce.job.maps");
configuration.get("mapreduce.job.reduces");
or for Reducers
job.getNumReduceTasks();
Specifying the mappers with the configuration values will not work when mapreduce.jobtracker.address is "local". See Charles' answer where he explains how Hadoop usually determines the number of Mappers by data size.

Related

can Configuration.set be used in the Mapper?

I am trying to save some data from the Mapper to the Job/Main so that I can use it in other jobs.
I tried to use a static variable in my main class (that contains the main function) but when the Mapper adds data to the static variable and I try to print the variable when the job is done I find that there is no new data, it's like the Mapper modified another instance of that static variable..
Now i'm trying to use the Configuration to set the data from the Mapper:
Mapper
context.getConfiguration().set("3", "somedata");
Main
boolean step1Completed = step1.waitForCompletion(true);
System.out.println(step1.getConfiguration().get("3"));
Unfortunately this prints null.
Is there another way to do things? I am trying to save some data so that I use it in other jobs and I find using a file just for that a bit extreme since the data is only an index of int,string to map some titles that I will need in my last job.
It is not possible as soon as I know. Mappers and Reducers work independently in distributed fashion. Each task has its own local conf instance. You have to persist data to HDFS while each job is independent.
You can also take advantage of MapReduce Chaining mechanism(example) to run a chain of jobs. In addition, you can design workflow in Azkaban, Oozie and etc to pass output to another job.
It is indeed not possible since the configuration goes from the job to the mapper/reducer and not the other way around.
I ended up just reading the file directly from the HDFS in my last job's setup.
Thank you all for the input.

Hadoop - Merge reducer outputs to a single file using Java

I have a pig script that generates some output to a HDFS directory. The pig script also generates a SUCCESS file in the same HDFS directory. The output of the pig script is split into multiple parts as the number of reducers to use in the script is defined via 'SET default_parallel n;'
I would like to now use Java to concatenate/merge all the file parts into a single file. I obviously want to ignore the SUCCESS file while concatenating. How can I do this in Java?
Thanks in advance.
you can use getmerge through shell command to merge multiple file into single file.
Usage: hdfs dfs -getmerge <srcdir> <destinationdir/file.txt>
Example: hdfs dfs -getmerge /output/dir/on/hdfs/ /desired/local/output/file.txt
In case you don't want to use shell command to do it. You can write a java program and can use FileUtil.copyMerge method to merge output file into single file. The implementation details are available in this link
if you want a single output on hdfs itself through pig then you need to pass it through single reducer. You need to set number of reducer 1 to do so. you need to put below line at the start of your script.
--Assigning only one reducer in order to generate only one output file.
SET default_parallel 1;
I hope this will help you.
The reason why this does not seem easy to do, is typically there would be little purpose. If I have a very large cluster, and I am really dealing with a Big Data problem, my output file as a single file would probably not fit onto any single machine.
That being said, I can see use metrics collections where maybe you want just output some metrics about your data, like counts.
In that case I would first run your MapReduce program,
Then create a 2nd map/reduce job that reads the data, and reduces all the elements to the single same reducer by using the a static key with your reduce function.
Or you could also just use a single mapper with your original program with
Job.setNumberOfReducer(1);

Multiple Inputs : Adding same input to multiple mappers for comparison

I have two Mapper Classes which take some files from the same folder as input and based on the name of the file which has a timestamp determines which mapper the file has to be given as an Input. At times it so happens that the same input file is to be given as an input to two different Mappers. Now I've tested it to work when two different inputs are given to both Mappers but When I give them the same input , then one of the Mapper class doesn't generate the result to be used for comparison in the reducer.
The code is enormous so instead of putting it here , I'll describe what I had done. I created two lists and scanning through the files in the directory and based on the names of the files which have timestamps , I put them in two different lists and then add them to two different Mappers i.e. both of them are computed differently so I use different Mappers to compute , which is then used to compare in the reducer, but when it is the same Input file as the time criteria for both mappers is almost same one of the mapper doesn't generate any result. So is it because one mapper is not able to access the file because the other is using it and if that is the case is there any way around it.
Here MapPath1 is one list while MapPath2 is another
for(i=0;i<MapPath1.size();i++)
MultipleInputs.addInputPath(job,new Path(MapPath1.get(i)),TextInputFormat.class,Map1.class);
if(type.equals("comparative"))
for(i=0;i<MapPath2.size();i++)
MultipleInputs.addInputPath(job,new Path(MapPath2.get(i)),TextInputFormat.class,Map2.class);
Update
I just Found this question ( Multiple mappers in hadoop ) to be similar to mine but I don't want to be duplicating the input file as it can be large. Can any one direct me on how can I create two separate jobs using different Mappers and provide it to a single reducer.
one of the Mapper class doesn't generate the result to be used for comparison in the reducer.
My guess that both the mappers are getting launched on the same task tracker node and intermediate mapper output location is shared by both the mapper task - You should check the task tracker nodes where these map tasks are launched to confirm this.
Also you should run mapper(s) only job, by setting number of reduce tasks to zero and check the output - this is to confirm that mapper are not sharing output directories.
To give solution to your problem - it sounds like you are passing same file to both the mappers and data from both the mappers given to single reducer. This has some duplication, Is your job output ok to have this duplication?

Control number of hadoop mapper output files

I have a job for hadoop. When the job is stated, i have some number of mappers started. And each mapper write some file to disk, like part-m-00000, part-m-00001. As I understand, each mapper create one part file. I have big amount of data, so there must be more than one mapper, but can I somehow control number of this output files? I mean, hadoop will start, for example 10 mappers, but there will be only three part files?
I found this post
How do multiple reducers output only one part-file in Hadoop?
But there is using old version of hadoop library. I'm using classes from org.apache.hadoop.mapreduce.* and not from org.apache.hadoop.mapred.*
I'm using hadoop version 0.20, and hadoop-core:1.2.0.jar
Is there any possibility to do this, using new hadoop API?
The number of output files equals to the number of reducers or the number of the mappers if there aren't any reducers.
You can add a single reducer to your job so that the output from all the mappers will be directed to it and your get a single output file. Note that will be less efficient as all the data (output of mappers) will be sent over the wire (network IO) to the node where the reducer will run. Also since a single process will (eventually) get all the data it would probably run slower.
By the wat,the fact that there are multiple parts shouldn't be very significant as you can pass the directory containing them to subsequent jobs
Im not sure you can do it (your link is about multiple outputs not converging to only one), and why use only one output ? you will lose all parallelism on sort ?
Im also working on big files (~10GB each) and my MR process almost 100GB each. So to lower Map numbers, I set a higher value of block size in hdfs (applies only to newer files) and a higher value of mapred.min.split.size in mapred-site.xml
You might want to look at MultipleOutputFormat
Part of what Javadoc says:
This abstract class extends the FileOutputFormat, allowing to write
the output data to different output files.
Both Mapper and Reducer can use this.
Check this link for how you can specify a output file name or more from different mappers to output to HDFS.
NOTE: And, moreover, make sure you don't use context.write() so that, 10 files from 10 mapper don't get created. Use only MultipleOutputFormat to output.
If the job has no reducers, partitioners and combiners, each mapper outputs one output file. At some point, you should run some post processing to collect the outputs into large file.

dfs.block.size for Local hadoop jobs ?

I want to run a hadoop unit test, using the local filesystem mode... I would ideally like to see several part-m-* files written out to disk (rather than just 1). However, since it just a test, I dont want to process 64M of data (the default size is ~64megs per block, i believe).
In distributed mode we can set this using
dfs.block.size
I am wondering wether there a way that i can get my local file system to write small part-m files out, i.e. so that my unit test will mimic the contents of large scale data with several (albeit very small) files.
Assuming your input format can handle splitable files (see the org.apache.hadoop.mapreduce.lib.input.FileInputFormat.isSplitable(JobContext, Path) method), you can amend the input split size to process a smaller file with multi mappers (i'm going to assume you're using the new API mapreduce package):
For example, if you're using the TextInputFormat (or most input formats that extend FileInputFormat), you can call the static util methods:
FileInputFormat.setMaxInputSplitSize(Job, long)
FileInputFormat.setMinInputSplitSize(Job, long)
The long argument is the size of the split in bytes, so just set to you're desired size
Under the hood, these methods set the following job configuration properties:
mapred.min.split.size
mapred.max.split.size
Final note, some input formats may override the FileInputFormat.getFormatMinSplitSize() method (which defaults to 1 byte for FileInputFormat), so be weay if you set a value and hadoop is appearing to ignore it.
A final point - have you considered MRUnit http://incubator.apache.org/mrunit/ for actual 'unit' testing of your MR code?
try doing this it will work
hadoop fs -D dfs.block.size=16777216 -put 25090206.P .

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