Running the perl script file present in the jar file - java

I am new to perl but have done some programming in java facing a problem in running the perl script present in the jar file .
I am using windows and I have written a perl script to convert one type of file to another type .
I have checked the perl script with the java program using the Runtime and I am able to run the same as required and i am getting the output converted files as well (using the cmd line)
I have created a GUI in java to get the files to convert to the target files . I am able to run the file from netbeans IDE as will .
But when I am trying to run the jar file .
I am using URL to get the URL to the perl script .
URL url = this.getClass().getResource("/com/MyProject/FileConverter/fileconverter.pl");
and Runtime for Executing the script :
String[] cmd = {"perl",path,input_file,output_file};
process = Runtime.getRuntime().exec(cmd);
Please help in resolving the issue . Basically i do need to know how we can run the perl script present in the same jar file that we are executing.

You will have to read that perl file as resource and write it somewhere on file system as File (like this) and then pass that path to your command
See Also
Extract and load DLL from JAR

I'm assuming you have your perl script file in you jar and you don't want to extract it, just execute it "from inside".
One solution is to get the "stream" of your "resource" (your perl script), and then execute "perl" writing your script in the process' standard input.
This is better explained with a piece of code:
IMPORTANT CAVEAT: the path to your script in getResourceAsStream shouldn't start with /
// Start the process "perl"
Process process = Runtime.getRuntime().exec("perl");
// get the script as an InputStream to "inject" it to perl's standard input
try (
InputStream script = ClassLoader.getSystemClassLoader()
.getResourceAsStream("com/MyProject/FileConverter/fileconverter.pl");
OutputStream output = process.getOutputStream()
) {
// This is to "inject" your input and output file,
// as there is no other easy way ot specify command line arguments
// for your script
String firstArgs = "$ARGV[0] = \"" + input_file + "\";\n" +
"$ARGV[1] = \"" + output_file + "\";\n";
output.write(firstArgs.getBytes());
// send the rest of your cript to perl
byte[] buffer = new byte[2048];
int size;
while((size = script.read(buffer)) != -1) {
output.write(buffer, 0, size);
}
output.flush();
}
// just in case... wait for perl to finish
process.waitFor();

Related

How to perform java command prompt action on unix

I have two jar files named test1.jar and test2.jar.
In order to execute a function in in this jar file, I run below command in cmd.
“java getOutput argument1 argument2 argument3 argument4”
As a pre-requisite, I have set the following entries in my system environment variables to execute the java function using the above command.
1.CLASSPATH=C:\Folder\test1.jar;C:\Folder\test2.jar;C:\Program Files\Java\jre1.8.0_181\lib\plugin.jar
2.JAVA_BIN=C:\Program Files\Java\jre1.8.0_181\bin
3.JAVA_HOME=C:\Program Files\Java\jre1.8.0_181
4.PATH = C:\Program Files\Java\jre1.8.0_181\bin
The output of the above command is a string.
I have another java code. I have to capture the above string output in a variable in my java program and I am able to do this by using below java code in eclipse.
String strArgs= strArg1+" "+strArg2+" "+strArg3+" "+strArg4;
Process p=Runtime.getRuntime().exec("cmd /c java getOutput "+strArgs+"");
BufferedReader input =new BufferedReader(new
InputStreamReader(p.getInputStream()));
String strOutput = input.readLine();
if (strOutput != null) {
System.out.println(strOutput);
String strVariable = strOutput;
input.close();
}else {
System.out.println("FAIL- Output not generated");
}
In order to execute the above code on unix, I replace Line 2 with "Process p=Runtime.getRuntime().exec("usr/bin/java getOutput "+strArgs+"");" , convert the eclipse java project into a jar file named automation.jar. And I try to execute this jar file on unix using the below command .
`java -cp automation.jar Package.MainClass.'
When I run the code I get the output as null. But when I run the command on windows command prompt I get the output string.
Could you please help me on how to set the system variables in unix and perform the above operation to generate the string output.
Please let me know if any additional information required.
cmd is windows only. Unix uses a shell. But you shouldn't need either here. Just remove the cmd call.
Process p = Runtime.getRuntime().exec("java getOutput " + strArgs);
If it can't find Java, you can read the JAVA_BIN (or JAVA_HOME) from the environment.
String java_bin = System.getenv("JAVA_BIN");
Process p = Runtime.getRuntime().exec(java_bin + "/java getOutput " + strArgs);
Finally, your environment variables look like Windows path variables. Make sure they're correct for your Unix environment (Unix doesn't have a "C" drive).

How to pass file as an argument to Python process invoked by Java

I am running Java program to call Python process using process builder as shown below,
processBuilder = new ProcessBuilder(
Arrays.asList(
"/usr/bin/python",
"/opt/gui/oc_db5.py",
"-c",
"/opt/gui/test.json")
);
processBuilder.directory(new File("/opt/gui"));
processBuilder.start();
Location of python program is under /opt/gui directory and there is one test.json file also needs to be passed as parameter, with "-c" option, However what i am seeing is that system is appending location of java program with path of JSON file and then pick the .JSON file causing issue for Python code.
What actually python program is getting is /opt/java//opt/gui/test.json. I tried ../../ as well but it didn't work with test.json file.
Is there a way i can specify .JSON file as an argument to python program?
This seemed to work for me. I mean, it fixed the directory problem.
try {
int exitCode = Runtime.getRuntime().exec("python /opt/gui/oc_db5.py -c /opt/gui/test.json", null, new File("/")).waitFor(); // run program and get exit code
} catch(Exception e) { // is there an error?
e.printStackTrace(); // print error
}

bat file does not execute within Java

I have written some code for executing .bat file. which contains some
commands like setting java classpath,etc..And finally there is one command
which runs a Java class file.The HelloWorld class converts some xml file and generating a new xml file in some folder. When I double click .bat file, it executes fine,
but when I try to run I am not getting any output as I was getting through
double click the .bat file. How to make a batch execute and probably it would be nice
if I could see the results through Java console.
Following is MyJava code to execute the .bat file
public void run2() {
try {
String []commands = {"cmd.exe","/C","C:/MyWork/Java/classes/run.bat"} ;
Process p = Runtime.getRuntime().exec(commands);
BufferedReader in = new BufferedReader(new InputStreamReader(
p.getInputStream()));
String line = null;
while ((line = in.readLine()) != null) {
System.out.println(line);
}
} catch (IOException e) {
e.printStackTrace();
}
}
And below the some commands which has been set to .bat file
set CLASSPATH=%CLASSPATH%;C:/MyWork/Java
set CLASSPATH=%CLASSPATH%;C:/MyWork/Java/classes
java -cp test.jar;test2.jar test.HelloWorld
Tried with "/C" commad as well. It does not execute. Actually it does not give effect of double click the .bat file. Is there any other way that I can try with?
I can see the contents inside the .bat file through Eclipse console. But it does not give the desired output. Desired output means when I double click .bat file, it executes well. But through java call, I can see the contents only .
When using cmd.exe use /C-Parameter to pass command:
String []commands = {"cmd.exe","/C","C:/MyWork/Java/classes/run.bat"} ;
according to this, the Windows CMD needs the /c argument, to execute commands like this. try this:
String []commands = {"cmd.exe","/c","C:/MyWork/Java/classes/run.bat"} ;
Windows uses \ backslash for Windows and MS-DOS path delimiter. Forward slash / is accepted by Java in the java.io package and translated to be a path delimiter, but will not be directly acceptable to Windows or accepted by the cmd.exe shell.
You may also need to specify either the working directory for the batch file to be executed in, or possibly a full path to the cmd.exe command interpreter.
See: Runtime.exec (String[] cmdarray, String[] envp, File dir)
String[] commands = {"C:\\Windows\\System32\\cmd.exe", "/c",
"C:\\MyWork\\Java\\classes\\run.bat"};
File workDir = new File( "C:/MyWork");
Process process = Runtime.getRuntime().exec( commands, null, workDir);
To verify if the batch file is run at all, add a pause command to the batch file. That will keep the window open so you can verify if the batch file is launched at all, and debug this stage-by-stage.
You do not read the error output of your batch file, therefore, you'll never see any error messages printed from there or from CMD.EXE itself. In addition, the sub-program may stall and just wait for you to read the error stream.
Please see related discussions here: How to make a java program to print both out.println() and err.println() statements?

Imagemagick can't open file when executed from Java Servlet

I'm trying to convert files from png's to pdf using imagemagick and Java. I've got everything working to a place when I'm executing imagemagick command to actually merge multiple png's into one pdf. The command itself looks properly, and it works fine when executed in the terminal but my application gives me error showing that imgck can't open the file (even though it exists and I've set permissions to the folder to 777 :
line: convert: unable to open image `"/Users/mk/Documents/workspace/.metadata/.plugins/org.eclipse.wst.server.core/tmp0/wtpwebapps/sch-java/print-1357784001005.png"': No such file or directory # error/blob.c/OpenBlob/2642.
This is my command :
/opt/local/bin/convert "/Users/mk/Documents/workspace/.metadata/.plugins/org.eclipse.wst.server.core/tmp0/wtpwebapps/sch-java/print-1357784001005.png" "/Users/mk/Documents/workspace/.metadata/.plugins/org.eclipse.wst.server.core/tmp0/wtpwebapps/sch-java/print-1357784001219.png" "/Users/mk/Documents/workspace/.metadata/.plugins/org.eclipse.wst.server.core/tmp0/wtpwebapps/sch-java/complete-exportedPanel2013-01-1003:13:17.212.pdf"
And my Java code :
String filesString = "";
for (String s : pdfs){
filesString += "\""+ s + "\" ";
}
Process imgkProcess = null;
BufferedReader br = null;
File f1 = new File(pdfs[0]);
//returns true
System.out.println("OE: "+f1.exists());
String cmd = imgkPath+"convert "+ filesString+ " \""+outputPath+outName+"\"";
try {
imgkProcess = Runtime.getRuntime().exec(cmd);
InputStream stderr = imgkProcess.getErrorStream();
InputStreamReader isr = new InputStreamReader(stderr);
br = new BufferedReader(isr);
} catch (IOException e1) {
msg = e1.getMessage();
}
imgkProcess.waitFor();
while( (line=br.readLine() ) != null){
System.out.println("line: "+line);
}
The whole code is executed from a java servlet controller after getting request from a form. Any ideas what can cause this ? I'm using latest imgck, jdk, and osx 10.7 .
A few things:
When spawning anything but really trivial processes, it's usually better to use ProcessBuilder than Runtime.exec() - it gives you much better control
Even with ProcessBuilder, it often works better to write a shell script that does what you need. Then spawn a process to run the script. You get a lot more control in shell script than you do in ProcessBuilder
Remember that a spawned process is not a shell. It can't, for instance, evaluate expressions, or expand shell variables. If you need that, then you must execute a shell (like sh or bash). Better yet, write a shell script as described above
If all you need to do is to execute some ImageMagick commands, it would probably be easier to jmagick, a Java interface to ImageMagick - see http://www.jmagick.org/
Actually, since the you're assembling images into a PDF, the iText library - http://itextpdf.com is probably the best tool for the job, as it is native Java code, does not require spawning a native process, and will therefore be much more portable.
Solved it by adding all arguments to an arrayList and then casting it to String array.
ArrayList<String> cmd = new ArrayList<String>();
cmd.add(imgkPath+"convert");
for (int i=0, l=pdfs.length; i<l; i++){
cmd.add(pdfs[i]);
}
cmd.add(outputPath+outName);
imgkProcess = Runtime.getRuntime().exec(cmd.toArray(new String[cmd.size()]));

Executing a shell script inside a jar file. How to extract?

I am developing a Linux-only Java application, and I need to execute a shell script in it. According to what I have read, the only way to execute that shell script is by extracting it from the jar file and executing it. The question is? How can I extract that shell script at runtime?
Thank you in advance
Unix does not know how to run scripts inside jar files. You must create a file (there are routines to create temporary files in the runtime) with the given content and then run that file - see How to run Unix shell script from Java code? for instructions. When done, delete it from the filesystem.
I found this question today ... i think there is a better answer:
unzip -p JARFILE SCRIPTFILE | bash
should do it.
where JARFILE is the path to the jar file
and SCRIPTFILE is the path WITHIN the jar of the script file to execute.
this will extract the file to stdout which is then piped to the shell (bash)
As someone has mentioned before, you can copy the content in the bundle resource to a temp location, execute the script, and remove the script in the temp location.
Here is the code to do that. Note that I am using Google Guava library.
// Read the bundled script as string
String bundledScript = CharStreams.toString(
new InputStreamReader(getClass().getResourceAsStream("/bundled_script_path.sh"), Charsets.UTF_8));
// Create a temp file with uuid appended to the name just to be safe
File tempFile = File.createTempFile("script_" + UUID.randomUUID().toString(), ".sh");
// Write the string to temp file
Files.write(bundledScript, tempFile, Charsets.UTF_8);
String execScript = "/bin/sh " + tempFile.getAbsolutePath();
// Execute the script
Process p = Runtime.getRuntime().exec(execScript);
// Output stream is the input to the subprocess
OutputStream outputStream = p.getOutputStream();
if (outputStream != null) {
outputStream.close();
}
// Input stream is the normal output of the subprocess
InputStream inputStream = p.getInputStream();
if (inputStream != null) {
// You can use the input stream to log your output here.
inputStream.close();
}
// Error stream is the error output of the subprocess
InputStream errorStream = p.getErrorStream();
if (errorStream != null) {
// You can use the input stream to log your error output here.
errorStream.close();
}
// Remove the temp file from disk
tempFile.delete();
Do not bundle the script in your jar in the first place. Deploy the scripts as independent files.

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