Develop Reference

Spring 4.0 + hibernate 5.2 program getting below issue

Caused by: java.lang.ClassNotFoundException: org.springframework.orm.hibernate5.HibernateTransactionManager
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1892)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1735)
at org.springframework.util.ClassUtils.forName(ClassUtils.java:247)
at org.springframework.beans.factory.support.AbstractBeanDefinition.resolveBeanClass(AbstractBeanDefinition.java:395)
at org.springframework.beans.factory.support.AbstractBeanFactory.doResolveBeanClass(AbstractBeanFactory.java:1348)
at org.springframework.beans.factory.support.AbstractBeanFactory.resolveBeanClass(AbstractBeanFactory.java:1319)
... 50 more
Nov 17, 2017 7:23:43 AM org.apache.catalina.core.ApplicationContext log
SEVERE: StandardWrapper.Throwable
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerMapping#0': Invocation of init method failed; nested exception is org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find class [org.springframework.orm.hibernate5.LocalSessionFactoryBean] for bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/spring-mvc-crud-demo-servlet.xml]; nested exception is java.lang.ClassNotFoundException: org.springframework.orm.hibernate5.LocalSessionFactoryBean
Related cause: org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find class [org.springframework.orm.hibernate5.LocalSessionFactoryBean] for bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/spring-mvc-crud-demo-servlet.xml]; nested exception is java.lang.ClassNotFoundException: org.springframework.orm.hibernate5.LocalSessionFactoryBean
Related cause: org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find class [org.springframework.orm.hibernate5.HibernateTransactionManager] for bean with name 'myTransactionManager' defined in ServletContext resource [/WEB-INF/spring-mvc-crud-demo-servlet.xml]; nested exception is java.lang.ClassNotFoundException: org.springframework.orm.hibernate5.HibernateTransactionManager
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1553)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:539)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:703)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1269)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1182)
at org.apache.catalina.core.StandardWrapper.allocate(StandardWrapper.java:853)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:135)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:506)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:962)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1115)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Unknown Source)
Caused by: org.springframework.beans.factory.CannotLoadBeanClassException: Cannot find class [org.springframework.orm.hibernate5.LocalSessionFactoryBean] for bean with name 'sessionFactory' defined in ServletContext resource [/WEB-INF/spring-mvc-crud-demo-servlet.xml]; nested exception is java.lang.ClassNotFoundException: org.springframework.orm.hibernate5.LocalSessionFactoryBean
at org.springframework.beans.factory.support.AbstractBeanFactory.resolveBeanClass(AbstractBeanFactory.java:1327)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.predictBeanType(AbstractAutowireCapableBeanFactory.java:594)
at org.springframework.beans.factory.support.AbstractBeanFactory.isFactoryBean(AbstractBeanFactory.java:1396)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doGetBeanNamesForType(DefaultListableBeanFactory.java:385)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.getBeanNamesForType(DefaultListableBeanFactory.java:362)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.getBeanNamesForType(DefaultListableBeanFactory.java:348)
at org.springframework.context.support.AbstractApplicationContext.getBeanNamesForType(AbstractApplicationContext.java:1051)

Looks like you didn't include needed library.
LocalSessionFactoryBean is a part of spring-orm, did you include it?
See here: https://mvnrepository.com/artifact/org.springframework/spring-orm

java8 war deployment fails in tomcat

I have migrated my spring app from java 7 to java 8 and done relevant changes in pom.xml. I am getting error when I deploying the war into tomcat server during startup. But it works well in java 7. Please see the below exception and share your suggestions.
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'optimusMQ' defined in file [D:\Projects\ESS\optimus_java8_workspace\.metadata\.plugins\org.eclipse.wst.server.core\tmp0\wtpwebapps\optimus\WEB-INF\classes\META-INF\spring\web-applicationContext-jms.xml]: Initialization of bean failed; nested exception is java.lang.NoClassDefFoundError: Ljavax/transaction/TransactionSynchronizationRegistry;
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:547)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:703)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:403)
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:306)
at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:106)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4887)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5381)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1559)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1549)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.NoClassDefFoundError: Ljavax/transaction/TransactionSynchronizationRegistry;
at java.lang.Class.getDeclaredFields0(Native Method)
at java.lang.Class.privateGetDeclaredFields(Class.java:2583)
at java.lang.Class.getDeclaredFields(Class.java:1916)
at org.springframework.orm.jpa.support.PersistenceAnnotationBeanPostProcessor.findPersistenceMetadata(PersistenceAnnotationBeanPostProcessor.java:392)
at org.springframework.orm.jpa.support.PersistenceAnnotationBeanPostProcessor.postProcessMergedBeanDefinition(PersistenceAnnotationBeanPostProcessor.java:332)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyMergedBeanDefinitionPostProcessors(AbstractAutowireCapableBeanFactory.java:908)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:512)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1456)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1197)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:537)
... 20 more
Caused by: java.lang.ClassNotFoundException: javax.transaction.TransactionSynchronizationRegistry
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1713)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1558)
... 37 more

Spring Data Neo4j exceptions

I need your help... creating custom user authentication logic with spring, spring-security, spring-data, neo4j and maven on java wasn't successful for me this time.
Here's it, full stacktrace:
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.data.neo4j.config.Neo4jConfiguration#0': Cannot resolve reference to bean 'graphDatabaseService' while setting bean property 'graphDatabaseService'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in class path resource [beans.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:336)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1456)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1197)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:537)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:703)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1241)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1154)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1041)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4922)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5204)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1396)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1386)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in class path resource [beans.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:597)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328)
... 31 more
Caused by: org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:188)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:586)
... 40 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:358)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:59)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:90)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:199)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
... 41 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.StoreLockerLifecycleAdapter#3bcdfd8c' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:513)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:335)
... 49 more
Caused by: org.neo4j.kernel.StoreLockException: Unable to obtain lock on store lock file: /home/beaver/dev/data/cyoudb/store_lock. Please ensure no other process is using this database, and that the directory is writable (required even for read-only access)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:78)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
... 51 more
Caused by: java.nio.channels.OverlappingFileLockException
at sun.nio.ch.SharedFileLockTable.checkList(FileLockTable.java:255)
at sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152)
at sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1060)
at java.nio.channels.FileChannel.tryLock(FileChannel.java:1155)
at org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.tryLock(StoreFileChannel.java:142)
at org.neo4j.kernel.impl.nioneo.store.FileLock.wrapFileChannelLock(FileLock.java:35)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:93)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:92)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
... 53 more
Jul 14, 2014 10:48:53 PM org.apache.catalina.core.ApplicationContext log
SEVERE: StandardWrapper.Throwable
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.data.neo4j.config.Neo4jConfiguration#0': Cannot resolve reference to bean 'graphDatabaseService' while setting bean property 'graphDatabaseService'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in class path resource [beans.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:336)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1456)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1197)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:537)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:703)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1241)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1154)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1041)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4922)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5204)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1396)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1386)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in class path resource [beans.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:597)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328)
... 31 more
Caused by: org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase()] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:188)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:586)
... 40 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, /home/beaver/dev/data/cyoudb
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:358)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:59)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:90)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:199)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
... 41 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.StoreLockerLifecycleAdapter#3bcdfd8c' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:513)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:335)
... 49 more
Caused by: org.neo4j.kernel.StoreLockException: Unable to obtain lock on store lock file: /home/beaver/dev/data/cyoudb/store_lock. Please ensure no other process is using this database, and that the directory is writable (required even for read-only access)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:78)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
... 51 more
Caused by: java.nio.channels.OverlappingFileLockException
at sun.nio.ch.SharedFileLockTable.checkList(FileLockTable.java:255)
at sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152)
at sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1060)
at java.nio.channels.FileChannel.tryLock(FileChannel.java:1155)
at org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.tryLock(StoreFileChannel.java:142)
at org.neo4j.kernel.impl.nioneo.store.FileLock.wrapFileChannelLock(FileLock.java:35)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:93)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:92)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
... 53 more
Jul 14, 2014 10:48:53 PM org.apache.catalina.core.StandardContext loadOnStartup
SEVERE: Servlet /cyou threw load() exception
java.nio.channels.OverlappingFileLockException
at sun.nio.ch.SharedFileLockTable.checkList(FileLockTable.java:255)
at sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152)
at sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1060)
at java.nio.channels.FileChannel.tryLock(FileChannel.java:1155)
at org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.tryLock(StoreFileChannel.java:142)
at org.neo4j.kernel.impl.nioneo.store.FileLock.wrapFileChannelLock(FileLock.java:35)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:93)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:92)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:335)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:59)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:90)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:199)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:483)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:586)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1456)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1197)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:537)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:703)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1241)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1154)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1041)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4922)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5204)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1396)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1386)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
I've tried the old version of instantiating - with help of new EmbeddedDatabase constructor via spring DI...now it's deprecated so i've used a factory. I've tried a lot of stuff in configurations...but with no luck.
Seems the problem is in file called store_lock in cyoudb folder. I've renamed it to this name just because thought that the dot in the name of directory caused some io errors...no luck:(

Try to use the config as outlined in the docs:
http://docs.spring.io/spring-data/data-neo4j/docs/current/reference/html/setup.html#d0e3716
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:context="http://www.springframework.org/schema/context"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:neo4j="http://www.springframework.org/schema/data/neo4j"
xsi:schemaLocation="
http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans.xsd
http://www.springframework.org/schema/context
http://www.springframework.org/schema/context/spring-context.xsd
http://www.springframework.org/schema/data/neo4j
http://www.springframework.org/schema/data/neo4j/spring-neo4j.xsd">
<context:annotation-config/>
<neo4j:config
storeDirectory="/home/beaver/dev/data/cyoudb11"
base-package="org.example.domain"/>
<neo4j:repositories base-package="org.example.repository"/>
</beans>

Spring Data Gemfire store java.lang.Class field

In my code I have a generic "Value" POJO, which contains value itself and it's class:
public class Value<T extends Serializable> implements Serializable {
private T value;
private Class<T> type;
...
}
I am using Spring Data GemFire and "repositories" feature of Spring Data (the DAOs are created automatically from interfaces). When Spring creates DAO for this bean I got:
FactoryBean threw exception on object creation; nested exception is java.lang.SecurityException: Can not make a java.lang.Class constructor accessible:
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'conditionProcessor': Injection of resource dependencies failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'globalStatusElementDAO': FactoryBean threw exception on object creation; nested exception is java.lang.SecurityException: Can not make a java.lang.Class constructor accessible
at org.springframework.context.annotation.CommonAnnotationBeanPostProcessor.postProcessPropertyValues(CommonAnnotationBeanPostProcessor.java:307) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1185) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:537) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:700) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:403) ~[spring-web-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:306) ~[spring-web-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:106) [spring-web-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4973) [tomcat-embed-core-7.0.52.jar:7.0.52]
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5467) [tomcat-embed-core-7.0.52.jar:7.0.52]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) [tomcat-embed-core-7.0.52.jar:7.0.52]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1559) [tomcat-embed-core-7.0.52.jar:7.0.52]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1549) [tomcat-embed-core-7.0.52.jar:7.0.52]
at java.util.concurrent.FutureTask.run(FutureTask.java:262) [na:1.7.0_51]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) [na:1.7.0_51]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) [na:1.7.0_51]
at java.lang.Thread.run(Thread.java:744) [na:1.7.0_51]
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'globalStatusElementDAO': FactoryBean threw exception on object creation; nested exception is java.lang.SecurityException: Can not make a java.lang.Class constructor accessible
at org.springframework.beans.factory.support.FactoryBeanRegistrySupport.doGetObjectFromFactoryBean(FactoryBeanRegistrySupport.java:151) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.FactoryBeanRegistrySupport.getObjectFromFactoryBean(FactoryBeanRegistrySupport.java:103) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getObjectForBeanInstance(AbstractBeanFactory.java:1514) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:315) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:200) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.annotation.CommonAnnotationBeanPostProcessor.autowireResource(CommonAnnotationBeanPostProcessor.java:445) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.annotation.CommonAnnotationBeanPostProcessor.getResource(CommonAnnotationBeanPostProcessor.java:419) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.annotation.CommonAnnotationBeanPostProcessor$ResourceElement.getResourceToInject(CommonAnnotationBeanPostProcessor.java:544) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.annotation.InjectionMetadata$InjectedElement.inject(InjectionMetadata.java:155) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:87) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.context.annotation.CommonAnnotationBeanPostProcessor.postProcessPropertyValues(CommonAnnotationBeanPostProcessor.java:304) ~[spring-context-4.0.2.RELEASE.jar:4.0.2.RELEASE]
... 22 common frames omitted
Caused by: java.lang.SecurityException: Can not make a java.lang.Class constructor accessible
at java.lang.reflect.AccessibleObject.setAccessible0(AccessibleObject.java:139) ~[na:1.7.0_51]
at java.lang.reflect.AccessibleObject.setAccessible(AccessibleObject.java:129) ~[na:1.7.0_51]
at org.springframework.util.ReflectionUtils.makeAccessible(ReflectionUtils.java:444) ~[spring-core-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.data.mapping.PreferredConstructor.<init>(PreferredConstructor.java:57) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.model.PreferredConstructorDiscoverer.buildPreferredConstructor(PreferredConstructorDiscoverer.java:106) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.model.PreferredConstructorDiscoverer.<init>(PreferredConstructorDiscoverer.java:74) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.model.BasicPersistentEntity.<init>(BasicPersistentEntity.java:79) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.model.BasicPersistentEntity.<init>(BasicPersistentEntity.java:62) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.gemfire.mapping.GemfirePersistentEntity.<init>(GemfirePersistentEntity.java:40) ~[spring-data-gemfire-1.3.3.RELEASE.jar:1.3.3.RELEASE]
at org.springframework.data.gemfire.mapping.GemfireMappingContext.createPersistentEntity(GemfireMappingContext.java:38) ~[spring-data-gemfire-1.3.3.RELEASE.jar:1.3.3.RELEASE]
at org.springframework.data.gemfire.mapping.GemfireMappingContext.createPersistentEntity(GemfireMappingContext.java:29) ~[spring-data-gemfire-1.3.3.RELEASE.jar:1.3.3.RELEASE]
at org.springframework.data.mapping.context.AbstractMappingContext.addPersistentEntity(AbstractMappingContext.java:246) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.context.AbstractMappingContext$PersistentPropertyCreator.doWith(AbstractMappingContext.java:398) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.util.ReflectionUtils.doWithFields(ReflectionUtils.java:579) ~[spring-core-4.0.2.RELEASE.jar:4.0.2.RELEASE]
at org.springframework.data.mapping.context.AbstractMappingContext.addPersistentEntity(AbstractMappingContext.java:260) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.context.AbstractMappingContext.getPersistentEntity(AbstractMappingContext.java:171) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.context.AbstractMappingContext.getPersistentEntity(AbstractMappingContext.java:140) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.mapping.context.AbstractMappingContext.getPersistentEntity(AbstractMappingContext.java:66) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.gemfire.repository.support.GemfireRepositoryFactory.getEntityInformation(GemfireRepositoryFactory.java:81) ~[spring-data-gemfire-1.3.3.RELEASE.jar:1.3.3.RELEASE]
at org.springframework.data.gemfire.repository.support.GemfireRepositoryFactory.getTargetRepository(GemfireRepositoryFactory.java:97) ~[spring-data-gemfire-1.3.3.RELEASE.jar:1.3.3.RELEASE]
at org.springframework.data.repository.core.support.RepositoryFactorySupport.getRepository(RepositoryFactorySupport.java:136) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.repository.core.support.RepositoryFactoryBeanSupport.getObject(RepositoryFactoryBeanSupport.java:153) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.data.repository.core.support.RepositoryFactoryBeanSupport.getObject(RepositoryFactoryBeanSupport.java:43) ~[spring-data-commons-1.5.3.RELEASE.jar:na]
at org.springframework.beans.factory.support.FactoryBeanRegistrySupport.doGetObjectFromFactoryBean(FactoryBeanRegistrySupport.java:144) ~[spring-beans-4.0.2.RELEASE.jar:4.0.2.RELEASE]
... 32 common frames omitted
How can I store java.lang.Class in GemFire with Spring Data?
UPD:
public interface GlobalStatusElementDAO
extends CrudRepository<GlobalStatusElement, String>
{
}
#Region("xxx")
public class GlobalStatusElement<T extends Serializable>
extends Value<T>
{
public GlobalStatusElement( final Class<T> type )
{
super( type );
}
}

Class objects are generally not amenable to serialising via reflection. It is significantly easier to simply store the full class name and instantiate the class object from the name when you need it.
You could achieve this by either changing your Value class to store the class name as a String instead of the class object, or by changing how Value gets serialised.
For the second option, this can be done either by making Value implement DataSerializable, or by registering a DataSerializer for Value

Neo4j Spring Bean configuration

I have to following bean configurations
<?xml version="1.0" encoding="UTF-8"?>
<beans:beans xmlns="http://www.springframework.org/schema/mvc"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:beans="http://www.springframework.org/schema/beans"
xmlns:context="http://www.springframework.org/schema/context"
xmlns:tx="http://www.springframework.org/schema/tx"
xmlns:util="http://www.springframework.org/schema/util"
xsi:schemaLocation="http://www.springframework.org/schema/mvc http://www.springframework.org/schema/mvc/spring-mvc.xsd
http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd
http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd
http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd
http://www.springframework.org/schema/util http://www.springframework.org/schema/util/spring-util-2.0.xsd">
<beans:bean class="org.springframework.web.servlet.view.InternalResourceViewResolver">
<beans:property name="prefix" value="/WEB-INF/views/" />
<beans:property name="suffix" value=".jsp" />
</beans:bean>
<annotation-driven />
<resources mapping="/resources/**" location="/resources/" />
<beans:bean id="graphDbFactory" class="org.neo4j.graphdb.factory.GraphDatabaseFactory"/>
<beans:bean id="graphDatabaseService" factory-bean="graphDbFactory" factory-method="newEmbeddedDatabase">
<beans:constructor-arg value="D:/opt/neo4j-community-2.1.0-M01/data/graph.db"/>
</beans:bean>
<tx:annotation-driven transaction-manager="transactionManager"/>
<context:component-scan base-package="net.spring.neo4j" />
</beans:beans>
However I am getting lock error
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in ServletContext resource [/WEB-INF/dispatcher-servlet.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(java.lang.String)] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:591)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:700)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1279)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1192)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1087)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5210)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5493)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1559)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1549)
at java.util.concurrent.FutureTask.run(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Caused by: org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(java.lang.String)] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:188)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:580)
... 30 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:339)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:66)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(GraphDatabaseFactory.java:69)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
... 31 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.StoreLockerLifecycleAdapter#2d9d7019' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:513)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:316)
... 40 more
Caused by: org.neo4j.kernel.StoreLockException: Unable to obtain lock on store lock file: D:\opt\neo4j-community-2.1.0-M01\data\graph.db\store_lock. Please ensure no other process is using this database, and that the directory is writable (required even for read-only access)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:82)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
... 42 more
Caused by: java.io.IOException: Couldn't lock lock file D:\opt\neo4j-community-2.1.0-M01\data\graph.db\lock because another process already holds the lock.
at org.neo4j.kernel.impl.nioneo.store.FileLock.getLockFileBasedFileLock(FileLock.java:120)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:64)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:89)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
... 44 more
Mar 23, 2014 12:19:35 AM org.apache.catalina.core.ApplicationContext log
SEVERE: StandardWrapper.Throwable
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'graphDatabaseService' defined in ServletContext resource [/WEB-INF/dispatcher-servlet.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(java.lang.String)] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:591)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:700)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1279)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1192)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1087)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5210)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5493)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1559)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1549)
at java.util.concurrent.FutureTask.run(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Caused by: org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.neo4j.graphdb.GraphDatabaseService org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(java.lang.String)] threw exception; nested exception is java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:188)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:580)
... 30 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.EmbeddedGraphDatabase, D:\opt\neo4j-community-2.1.0-M01\data\graph.db
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:339)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:66)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(GraphDatabaseFactory.java:69)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
... 31 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.StoreLockerLifecycleAdapter#2d9d7019' was successfully initialized, but failed to start. Please see attached cause exception.
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:513)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:316)
... 40 more
Caused by: org.neo4j.kernel.StoreLockException: Unable to obtain lock on store lock file: D:\opt\neo4j-community-2.1.0-M01\data\graph.db\store_lock. Please ensure no other process is using this database, and that the directory is writable (required even for read-only access)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:82)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
... 42 more
Caused by: java.io.IOException: Couldn't lock lock file D:\opt\neo4j-community-2.1.0-M01\data\graph.db\lock because another process already holds the lock.
at org.neo4j.kernel.impl.nioneo.store.FileLock.getLockFileBasedFileLock(FileLock.java:120)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:64)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:89)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
... 44 more
Mar 23, 2014 12:19:35 AM org.apache.catalina.core.StandardContext loadOnStartup
SEVERE: Servlet /Spring-Neo4j threw load() exception
java.io.IOException: Couldn't lock lock file D:\opt\neo4j-community-2.1.0-M01\data\graph.db\lock because another process already holds the lock.
at org.neo4j.kernel.impl.nioneo.store.FileLock.getLockFileBasedFileLock(FileLock.java:120)
at org.neo4j.kernel.impl.nioneo.store.FileLock.getOsSpecificFileLock(FileLock.java:64)
at org.neo4j.kernel.DefaultFileSystemAbstraction.tryLock(DefaultFileSystemAbstraction.java:89)
at org.neo4j.kernel.StoreLocker.checkLock(StoreLocker.java:74)
at org.neo4j.kernel.StoreLockerLifecycleAdapter.start(StoreLockerLifecycleAdapter.java:44)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
at org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:316)
at org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:66)
at org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
at org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
at org.neo4j.graphdb.factory.GraphDatabaseFactory.newEmbeddedDatabase(GraphDatabaseFactory.java:69)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:166)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:580)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1094)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:989)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:504)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:475)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:304)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:228)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:300)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:195)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:700)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:760)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:482)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:658)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:624)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:672)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:543)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:484)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1279)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1192)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1087)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:5210)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5493)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1559)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1549)
at java.util.concurrent.FutureTask.run(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
I tried to manually remove the lock and it still does not work.
Edit:
tried with spring-data I am still having the same problem

What does the rest of your config look like?
Do you by chance open the graph database with the same path for another bean or config ?
It usually only happens if two instances are trying to access the same db.
You could also use the factory bean
org.springframework.data.neo4j.support.GraphDatabaseServiceFactoryBean.
<bean id="graphDatabaseService" class="org.springframework.data.neo4j.support.GraphDatabaseServiceFactoryBean"
destroy-method="shutdown" scope="singleton">
<constructor-arg value="target/config-test"/>
<constructor-arg>
<map>
<entry key="allow_store_upgrade" value="true"/>
</map>
</constructor-arg>
</bean>