NIO GZIP compression and copying of files - java

I was using FileChannel and FileInputStream to do a simple file copying from File fromFile to File toFile.
The code is basically like this:
source = new FileInputStream(fromFile).getChannel();
destination = new FileOutputStream(toFile, false).getChannel(); // overwrite
destination.transferFrom(source, 0, source.size());
where fromFile and toFile are proper File objects.
Now, instead of copying from fromFile directly, i wanted to compress its content using GZIP (found in Java libraries) and then copy to toFile. Also reversely, when I transfer back from toFile, I would like to decompress it as well.
I was wondering is there a simple way like
source = new GZIPCompressInputStream(new FileInputStream(fromFile)).getChannel();
or
source = new GZIPDecompressInputStream(new FileInputStream(fromFile)).getChannel();
and all the rest of code remain unchanged. Do you have any suggestion on the cleanest solution to this?
Thanks..

You could wrap your FileInputStream in a GZIPInputStream like so:
InputStream input = new GZIPInputStream(yourCompressedInput);
For compressing when writing, you should use the GZIPOutputStream.
Good luck.

Related

How to create a new java.io.File in memory? [duplicate]

This question already has answers here:
How to read file from ZIP using InputStream?
(7 answers)
Closed 1 year ago.
How can I create new File (from java.io) in memory, not on the hard disk?
I am using the Java language. I don't want to save the file on the hard drive.
I'm faced with a bad API (java.util.jar.JarFile). It's expecting File file of String filename. I have no file (only byte[] content) and can create temporary file, but it's not beautiful solution. I need to validate the digest of a signed jar.
byte[] content = getContent();
File tempFile = File.createTempFile("tmp", ".tmp");
FileOutputStream fos = new FileOutputStream(tempFile);
fos.write(archiveContent);
JarFile jarFile = new JarFile(tempFile);
Manifest manifest = jarFile.getManifest();
Any examples of how to achieve getting manifest without creating a temporary file would be appreciated.
How can I create new File (from java.io) in memory , not in the hard disk?
Maybe you are confusing File and Stream:
A File is an abstract representation of file and directory pathnames. Using a File object, you can access the file metadata in a file system, and perform some operations on files on this filesystem, like delete or create the file. But the File class does not provide methods to read and write the file contents.
To read and write from a file, you are using a Stream object, like FileInputStream or FileOutputStream. These streams can be created from a File object and then be used to read from and write to the file.
You can create a stream based on a byte buffer which resides in memory, by using a ByteArrayInputStream and a ByteArrayOutputStream to read from and write to a byte buffer in a similar way you read and write from a file. The byte array contains the "File's" content. You do not need a File object then.
Both the File... and the ByteArray... streams inherit from java.io.OutputStream and java.io.InputStream, respectively, so that you can use the common superclass to hide whether you are reading from a file or from a byte array.
It is not possible to create a java.io.File that holds its content in (Java heap) memory *.
Instead, normally you would use a stream. To write to a stream, in memory, use:
OutputStream out = new ByteArrayOutputStream();
out.write(...);
But unfortunately, a stream can't be used as input for java.util.jar.JarFile, which as you mention can only use a File or a String containing the path to a valid JAR file. I believe using a temporary file like you currently do is the only option, unless you want to use a different API.
If you are okay using a different API, there is conveniently a class in the same package, named JarInputStream you can use. Simply wrap your archiveContent array in a ByteArrayInputStream, to read the contents of the JAR and extract the manifest:
try (JarInputStream stream = new JarInputStream(new ByteArrayInputStream(archiveContent))) {
Manifest manifest = stream.getManifest();
}
*) It's obviously possible to create a full file-system that resides in memory, like a RAM-disk, but that would still be "on disk" (and not in Java heap memory) as far as the Java process is concerned.
You could use an in-memory filesystem, such as Jimfs
Here's a usage example from their readme:
FileSystem fs = Jimfs.newFileSystem(Configuration.unix());
Path foo = fs.getPath("/foo");
Files.createDirectory(foo);
Path hello = foo.resolve("hello.txt"); // /foo/hello.txt
Files.write(hello, ImmutableList.of("hello world"), StandardCharsets.UTF_8);
I think temporary file can be another solution for that.
File tempFile = File.createTempFile(prefix, suffix, null);
FileOutputStream fos = new FileOutputStream(tempFile);
fos.write(byteArray);
There is a an answer about that here.

How to print the content of a tar.gz file with Java?

I have to implement an application that permits printing the content of all files within a tar.gz file.
For Example:
if I have three files like this in a folder called testx:
A.txt contains the words "God Save The queen"
B.txt contains the words "Ubi maior, minor cessat"
C.txt.gz is a file compressed with gzip that contain the file c.txt with the words "Hello America!!"
So I compress testx, obtain the compressed tar file: testx.tar.gz.
So with my Java application I would like to print in the console:
"God Save The queen"
"Ubi maior, minor cessat"
"Hello America!!"
I have implemented the ZIP version and it works well, but keeping tar library from apache ant http://commons.apache.org/compress/, I noticed that it is not easy like ZIP java utils.
Could someone help me?
I have started looking on the net to understand how to accomplish my aim, so I have the following code:
GZIPInputStream gzipInputStream=null;
gzipInputStream = new GZIPInputStream( new FileInputStream(fileName));
TarInputStream is = new TarInputStream(gzipInputStream);
TarEntry entryx = null;
while((entryx = is.getNextEntry()) != null) {
if (entryx.isDirectory()) continue;
else {
System.out.println(entryx.getName());
if ( entryx.getName().endsWith("txt.gz")){
is.copyEntryContents(out);
// out is a OutputStream!!
}
}
}
So in the line is.copyEntryContents(out), it is possible to save on a file the stream passing an OutputStream, but I don't want it! In the zip version after keeping the first entry, ZipEntry, we can extract the stream from the compressed root folder, testx.tar.gz, and then create a new ZipInputStream and play with it to obtain the content.
Is it possible to do this with the tar.gz file?
Thanks.
surfing the net, i have encountered an interesting idea at : http://hype-free.blogspot.com/2009/10/using-tarinputstream-from-java.html.
After converting ours TarEntry to Stream, we can adopt the same idea used with Zip Files like:
InputStream tmpIn = new StreamingTarEntry(is, entryx.getSize());
// use BufferedReader to get one line at a time
BufferedReader gzipReader = new BufferedReader(
new InputStreamReader(
new GZIPInputStream(
inputZip )));
while (gzipReader.ready()) { System.out.println(gzipReader.readLine()); }
gzipReader.close();
SO with this code you could print the content of the file testx.tar.gz ^_^
To not have to write to a File you should use a ByteArrayOutputStream and use the public String toString(String charsetName)
with the correct encoding.

How to create a java.io.File from a ByteArrayOutputStream?

I'm reading a bunch of files from an FTP. Then I need to unzip those files and write them to a fileshare.
I don't want to write the files first and then read them back and unzip them. I want to do it all in one go. Is that possible?
This is my code
FTPClient fileclient = new FTPClient();
..
ByteArrayOutputStream out = new ByteArrayOutputStream();
fileclient.retrieveFile(filename, out);
??????? //How do I get my out-stream into a File-object?
File file = new File(?);
ZipFile zipFile = new ZipFile(file,ZipFile.OPEN_READ);
Any ideas?
You should use a ZipInputStream wrapped around the InputStream returned from FTPClient's retrieveFileStream(String remote).
You don't need to create the File object.
If you want to save the file you should pipe the stream directly into a ZipOutputStream
ByteArrayOutputStream out = new ByteArrayOutputStream();
ZipOutputStream zos = new ZipOutputStream(out);
// do whatever with your zip file
If, instead, you want to open the just retrieved file work with the ZipInputStream:
new ZipInputStream(fileClient.retrieveFileStream(String remote));
Just read the doc here and here
I think you want:
ZipInputStream zis = new ZipInputStream( new ByteArrayInputStream( out.toByteArray() ) );
Then read your data from the ZipInputStream.
As others have pointed out, for what you are trying to do, you don't need to write the downloaded ZIP "file" to the file system at all.
Having said that, I'd like to point out a misconception in your question, that is also reflected in some of the answers.
In Java, a File object does no really represent a file at all. Rather, it represents a file name or *path". While this name or path often corresponds to an actual file, this doesn't need to be the case.
This may sound a bit like hair-splitting, but consider this scenario:
File dir = new File("/tmp/foo");
boolean isDirectory = dir.isDirectory();
if (isDirectory) {
// spend a long time computing some result
...
// create an output file in 'dir' containing the result
}
Now if instances of the File class represented objects in the file system, then you'd expect the code that creates the output file to succeed (modulo permissions). But in fact, the create could fail because, something deleted the "/tmp/foo", or replaced it with a regular file.
It must be said that some of the methods on the File class do seem to assume that the File object does correspond to a real filesystem entity. Examples are the methods for getting a file's size or timestamps, or for listing the names in a directory. However, in each case, the method is specified to throw an exception if the actual file does not exist or has the wrong type for the operation requested.
Well, you could just create a FileOutputStream and then write the data from that:
FileOutputStream fos = new FileOutputStream(filename);
try {
out.writeTo(fos);
} finally {
fos.close();
}
Then just create the File object:
File file = new File(filename);
You need to understand that a File object doesn't represent any real data on disk - it's just a filename, effectively. The file doesn't even have to exist. If you want to actually write data, that's what FileOutputStream is for.
EDIT: I've just spotted that you didn't want to write the data out first - but that's what you've got to do, if you're going to pass the file to something that expects a genuine file with data in.
If you don't want to do that, you'll have to use a different API which doesn't expect a file to exist... as per Qwerky's answer.
Just change the ByteArrayOutputStream to a FileOutputStream.

Resources.openRawResource() issue Android

I have a database file in res/raw/ folder. I am calling Resources.openRawResource() with the file name as R.raw.FileName and I get an input stream, but I have an another database file in device, so to copy the contents of that db to the device db I use:
BufferedInputStream bi = new BufferedInputStream(is);
and FileOutputStream, but I get an exception that database file is corrupted. How can I proceed?
I try to read the file using File and FileInputStream and the path as /res/raw/fileName, but that also doesn't work.
Yes, you should be able to use openRawResource to copy a binary across from your raw resource folder to the device.
Based on the example code in the API demos (content/ReadAsset), you should be able to use a variation of the following code snippet to read the db file data.
InputStream ins = getResources().openRawResource(R.raw.my_db_file);
ByteArrayOutputStream outputStream=new ByteArrayOutputStream();
int size = 0;
// Read the entire resource into a local byte buffer.
byte[] buffer = new byte[1024];
while((size=ins.read(buffer,0,1024))>=0){
outputStream.write(buffer,0,size);
}
ins.close();
buffer=outputStream.toByteArray();
A copy of your file should now exist in buffer, so you can use a FileOutputStream to save the buffer to a new file.
FileOutputStream fos = new FileOutputStream("mycopy.db");
fos.write(buffer);
fos.close();
InputStream.available has severe limitations and should never be used to determine the length of the content available for streaming.
http://developer.android.com/reference/java/io/FileInputStream.html#available():
"[...]Returns an estimated number of bytes that can be read or skipped without blocking for more input. [...]Note that this method provides such a weak guarantee that it is not very useful in practice."
You have 3 solutions:
Go through the content twice, first just to compute content length, second to actually read the data
Since Android resources are prepared by you, the developer, hardcode its expected length
Put the file in the /asset directory and read it through AssetManager which gives you access to AssetFileDescriptor and its content length methods. This may however give you the UNKNOWN value for length, which isn't that useful.

How do I update a pre-existing Jar file

I've got a WAR file that I need to add two files to. Currently, I'm doing this:
File war = new File(DIRECTORY, "server.war");
JarOutputStream zos = new JarOutputStream(new BufferedOutputStream(new FileOutputStream(war)));
//Add file 1
File file = new File(DIRECTORY, "file1.jar");
InputStream is = new BufferedInputStream(new FileInputStream(file));
ZipEntry e = new ZipEntry("file1.jar");
zos.putNextEntry(e);
byte[] buf = new byte[1024];
int len;
while ((len = is.read(buf, 0, buf.length)) != -1) {
zos.write(buf, 0, len);
}
is.close();
zos.closeEntry();
//repeat for file 2
zos.close();
The result is that the previous contents get clobbered: the WAR has only the 2 files I just added in it. Is there some sort of append mode that I'm not using or what?
Yeah, there's an extra boolean argument to the FileOutputStream constructor which lets you force it to append to the file rather than overwrite it. Change your code to
JarOutputStream zos = new JarOutputStream(new BufferedOutputStream(new FileOutputStream(war, True)));
and it should work the way you want.
It seems this can't be done. I thought it was for a while, but it seems that it wasn't quite having the effect I wanted. Doing it this way resulted in the equivalent of two separate jar files concatinated together. The weird part was that the tools were making some sense of it. JAR found the first, original jar file and read me that. Glassfish's classloader was finding the later, new part, resulting in it loading only the added files as if they were all of the app. Weird.
So I've resurted to creating a new war, adding the contents of the old, adding the new files, closing, and copying the new over the old.
I have the same problem; I'm looking for an easy way to update a file in an existing jar file. If it's so easy to do a "jar uf foo.jar ..." command, how come there isn't a way to use Java API's to do the same?
Anyway, here is the RFE to add this functionality to Java; it also suggests some work-arounds:
http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=4129445
And here is a library that purports to make this a lot easier, by treating JARs/ZIPs like virtual directories:
https:// truezip.dev.java.net
I haven't figured out yet which approach I'm going to use for my current problem.

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