How to compare string in Java - java

In interview I got question to sort the array first in LNAME and then FNAME without using any in-built function like(compare, compareTo, Collections.sort).
String NAMES[][]={{"Abse","Blase"},{"Gua","Tysg"},{"Hysdt","Tyser"}};
Unfortunately, I compared the String like below
String fname;
String lname;
for (int i = 0; i < NAMES.length; i++) {
lname = NAMES[i][0];
for (int j = i + 1; j < NAMES.length; j++) {
if (NAMES[j][1] < lname) { // showing compilation error :(
}
}
}
And, I came to know that, It was wrong. Then, how can I compare them without using any in-built function ?
Note: I haven't added full snippet. Just wanted to know, how can we compare String.

According to the String.class compareTo(String s) method states the following. You can probably refer the below snippet but again it will not fulfil your requirement as the compareTo method uses Math function. But I believe this is what the interviewer was looking for.
public int compareTo(String s)
{
int i = value.length;
int j = s.value.length;
int k = Math.min(i, j);
char ac[] = value;
char ac1[] = s.value;
for(int l = 0; l < k; l++)
{
char c = ac[l];
char c1 = ac1[l];
if(c != c1)
return c - c1;
}
return i - j;
}

Pretty hard inteview question. It's more like a school assignment ;)
public void sort() {
String NAMES[][] = {{"Abse", "Blase"}, {"Gua", "Blase"}, {"Gua", "Tysg"}, {"Hysdt", "Tyser"}};
List<String[]> result = new ArrayList<>(3);
for (String[] name : NAMES) {
if (result.isEmpty()) {
result.add(name);
continue;
}
int addAt = 0;
for (String[] sortedName : result) {
if (isBefore(name, sortedName)) {
break;
}
addAt++;
}
result.add(addAt, name);
}
}
private boolean isBefore(String[] name, String[] name2) {
//last name
int position = 0;
char[] lastName1 = name[1].toLowerCase().toCharArray();
char[] lastName2 = name2[1].toLowerCase().toCharArray();
while (lastName1.length > position && lastName2.length > position) {
if (lastName1[position] < lastName2[position]) {
return true;
} else if (lastName1[position] > lastName2[position]) {
return false;
}
position++;
}
position = 0;
char[] firstName1 = name[0].toLowerCase().toCharArray();
char[] firstName2 = name2[0].toLowerCase().toCharArray();
while (firstName1.length > position && firstName2.length > position) {
if (firstName1[position] < firstName2[position]) {
return true;
} else if (firstName1[position] > firstName2[position]) {
return false;
}
position++;
}
//equal so whatever
return false;
}
I have a feeling you would be able to do this with lambdas a lot easier, but I don't really know

< or > operator cannot compare Strings, so we can use it to compare characters.
Maybe implement your own string comparision method. Which checks character by character and returns the String with the highest value.
public String compare(String s1, String s2)
{
for(int i = 0; i < Math.min(s1.length(), s2.length()); i++)
{
if(s1.charAt(i) > s2.charAt(i))
return s1;
}
return s2;
}
To complete the answer to your question.
public class GreatString {
/**
* #param args
*/
public static void main(String[] args) {
// TODO Auto-generated method stub
String NAMES[][] = { { "Abse", "Blase" }, { "Gua", "Tysg" },
{ "Hysdt", "Tyser" } };
int n = NAMES.length;
for (int i = 0; i < n; i++) {
for (int j = i; j < n; j++) {
if (NAMES[i][0].equals(NAMES[j][0])) {
if (compare(NAMES[i][1], NAMES[j][1])) {
String[] temp = NAMES[i];
NAMES[i] = NAMES[j];
NAMES[j] = temp;
} else {
if (compare(NAMES[i][0], NAMES[j][0])) {
String[] temp = NAMES[i];
NAMES[i] = NAMES[j];
NAMES[j] = temp;
}
}
}
}
}
for (int i = 0; i < n; i++) {
for (int j = 0; j < NAMES[i].length; j++) {
System.out.println(NAMES[i][j]);}}
}
private static boolean compare(String str1, String str2) {
// TODO Auto-generated method stub
int len = str1.length() < str2.length() ? str1.length() : str2.length();
for (int i = 0; i < len; i++) {
if (str1.charAt(i) > str2.charAt(i))
return true;
}
return false;
}
}

Related

Binary heap output not as expected

I have a homework that the teacher test if it's corrects by checking it's output using this website moodle.caseine.org, so to test my code the program execute these lines and compare the output with the expected one, this is the test :
Tas t = new Tas();
Random r = new Random(123);
for(int i =0; i<10000;i++)t.inser(r.nextInt());
for(int i =0;i<10000;i++)System.out.println(t.supprMax());
System.out.println(t);
And my Heap (Tas) class:
package td1;
import java.util.ArrayList;
import java.util.List;
public class Tas {
private List<Integer> t;
public Tas() {
t = new ArrayList<>();
}
public Tas(ArrayList<Integer> tab) {
t = new ArrayList<Integer>(tab);
}
public static int getFilsGauche(int i) {
return 2 * i + 1;
}
public static int getFilsDroit(int i) {
return 2 * i + 2;
}
public static int getParent(int i) {
return (i - 1) / 2;
}
public boolean estVide() {
return t.isEmpty();
}
#Override
public String toString() {
String str = "";
int size = t.size();
if (size > 0) {
str += "[" + t.get(0);
str += toString(0);
str += "]";
}
return str;
}
public boolean testTas() {
int size = t.size();
int check = 0;
if (size > 0) {
for (int i = 0; i < t.size(); i++) {
if (getFilsGauche(i) < size) {
if (t.get(i) < t.get(getFilsGauche(i))) {
check++;
}
}
if (getFilsDroit(i) < size) {
if (t.get(i) < t.get(getFilsDroit(i))) {
check++;
}
}
}
}
return check == 0;
}
public String toString(int i) {
String str = "";
int size = t.size();
if (getFilsGauche(i) < size) {
str += "[";
str += t.get(getFilsGauche(i));
str += toString(getFilsGauche(i));
str += "]";
}
if (getFilsDroit(i) < size) {
str += "[";
str += t.get(getFilsDroit(i));
str += toString(getFilsDroit(i));
str += "]";
}
return str;
}
//insert value and sort
public void inser(int value) {
t.add(value);
int index = t.size() - 1;
if (index > 0) {
inserCheck(index); // O(log n)
}
}
public void inserCheck(int i) {
int temp = 0;
int parent = getParent(i);
if (parent >= 0 && t.get(i) > t.get(parent)) {
temp = t.get(parent);
t.set(parent, t.get(i));
t.set(i, temp);
inserCheck(parent);
}
}
//switch position of last element is list with first (deletes first and return it)
public int supprMax() {
int size = t.size();
int max = 0;
if (size > 0) {
max = t.get(0);
t.set(0, t.get(size - 1));
t.remove(size - 1);
supprMax(0);
}
else {
throw new IllegalStateException();
}
return max;
}
public void supprMax(int i) {
int size = t.size();
int temp = 0;
int index = i;
if (getFilsGauche(i) < size && t.get(getFilsGauche(i)) > t.get(index)) {
index = getFilsGauche(i);
}
if (getFilsDroit(i) < size && t.get(getFilsDroit(i)) > t.get(index)) {
index = getFilsDroit(i);
}
if (index != i) {
temp = t.get(index);
t.set(index, t.get(i));
t.set(i, temp);
supprMax(index);
}
}
public static void tri(int[] tab) {
Tas tas = new Tas();
for (int i = 0; i < tab.length; i++) {
tas.inser(tab[i]);
}
for (int i = 0; i < tab.length; i++) {
tab[i] = tas.supprMax();
}
}
}
The last 3 lines of the test are :
-2145024521
-2147061786
-2145666206
But the last 3 of my code are :
-2145024521
-2145666206
-2147061786
The problem are probably with the inser and supprMax methods.
I hate to get a bad grade just because of 3 lines placement, because it is a program that verify the code, it dosn't care the the solution was close, it's still says it's wrong.

Finding first non repeating character in a string in relation to Big O

I solved a task concerning finding the first non-repeating character. For example, given the input "apple" the answer would be "a", the first character that isn't repeated. Even though "e" is not repeated it's not the first character. Another example: "lalas" answer is "s".
public static char firstNonRepeatingCharacter(String input) {
boolean unique;
int count = input.length();
char[] chars = input.toCharArray();
for (int i = 0; i < input.length(); i++) {
unique = true;
for (int j = 0; j < input.length(); j++) {
count--;
char c = chars[i];
if (i != j && c == chars[j]) {
unique = false;
break;
}
}
if (unique) {
return input.charAt(i);
}
}
return (0);
}
I want to simplify this code due to the nested loop having O(n2) complexity. I have been looking at the code trying to figure out if i could make it any faster but nothing comes to mind.
Another way is to find the first and last indexOf the character. If both are same then it is unique.
public static char firstNonRepeatingCharacter(String input) {
for(char c:input.toCharArray())
if(input.indexOf(c) == input.lastIndexOf(c))
return c;
return (0);
}
EDIT:
Or with Java 8+
return (char) input.chars()
.filter(c -> input.indexOf(c) == input.lastIndexOf(c))
.findFirst().orElse(0);
O(n) is better.
Use an intermedian structure to handle the number of repetitions.
public static char firstNonRepeatingCharacter(String input) {
boolean unique;
int count = input.length();
char[] chars = input.toCharArray();
for (int i = 0; i < input.length(); i++) {
unique = true;
for (int j = 0; j < input.length(); j++) {
count--;
char c = chars[i];
if (i != j && c == chars[j]) {
unique = false;
break;
}
}
if (unique) {
return input.charAt(i);
}
}
return (0);
}
public static char firstNonRepeatingCharacterMyVersion(String input) {
Map<String,Integer> map = new HashMap();
// first iteration put in a map the number of times a char appears. Linear O(n)=n
for (char c : input.toCharArray()) {
String character = String.valueOf(c);
if(map.containsKey(character)){
map.put(character,map.get(character) + 1);
} else {
map.put(character,1);
}
}
// Second iteration look for first element with one element.
for (char c : input.toCharArray()) {
String character = String.valueOf(c);
if(map.get(character) == 1){
return c;
}
}
return (0);
}
public static void main(String... args){
System.out.println(firstNonRepeatingCharacter("potatoaonionp"));
System.out.println(firstNonRepeatingCharacterMyVersion("potatoaonionp"));
}
See this solution. Similar to the above #Lucbel. Basically, using a LinkedList. We store all non repeating. However, we will use more space. But running time is O(n).
import java.util.LinkedList;
import java.util.List;
public class FirstNone {
public static void main(String[] args) {
System.out.println(firstNonRepeatingCharacter("apple"));
System.out.println(firstNonRepeatingCharacter("potatoaonionp"));
System.out.println(firstNonRepeatingCharacter("tksilicon"));
}
public static char firstNonRepeatingCharacter(String input) {
List<Character> charsInput = new LinkedList<>();
char[] chars = input.toCharArray();
for (int i = 0; i < input.length(); i++) {
if (charsInput.size() == 0) {
charsInput.add(chars[i]);
} else {
if (!charsInput.contains(chars[i])) {
charsInput.add(chars[i]);
} else if (charsInput.contains(chars[i])) {
charsInput.remove(Character.valueOf(chars[i]));
}
}
}
if (charsInput.size() > 0) {
return charsInput.get(0);
}
return (0);
}
}
private static int Solution(String s) {
// to check is values has been considered once
Set<String> set=new HashSet<String>();
// main loop
for (int i = 0; i < s.length(); i++) {
String temp = String.valueOf(s.charAt(i));
//rest of the values
String sub=s.substring(i+1);
if (set.add(temp) && !sub.contains(temp)) {
return i;
}
}
return -1;
}

Check whether two strings contain same characters in same order

''Given two string s and t, write a function to check if s contains all characters of t (in the same order as they are in string t).
Return true or false.
recursion not necessary.
here is the snippet of code that I am writing in java.
problem is for input: string1="st3h5irteuyarh!"
and string2="shrey"
it should return TRUE but it is returning FALSE. Why is that?''
public class Solution {
public static String getString(char x)
{
String s = String.valueOf(x);
return s;
}
public static boolean checkSequence(String s1, String s2)
{
String a = getString(s1.charAt(0));
String b = getString(s2.charAt(0));
for (int i = 1; i < s1.length(); i++)
if (s1.charAt(i) != s1.charAt(i - 1))
{
a += getString(s1.charAt(i));
}
for (int i = 1; i < s2.length(); i++)
if (s2.charAt(i) != s2.charAt(i - 1))
{
b += getString(s2.charAt(i));
}
if (!a.equals(b))
return false;
return true;
}
}
This is a solution:
public class Solution {
public static String getString(char x)
{
String s = String.valueOf(x);
return s;
}
public static boolean checkSequence(String s1, String s2)
{
String a = getString(s1.charAt(0));
String b = getString(s2.charAt(0));
int count = 0;
for (int i = 0; i < s1.length(); i++)
{
if (s1.charAt(i) == s2.charAt(count))
{
count++;
}
if (count == s2.length())
return true;
}
return false;
}
}
Each char of String s1 is compared with a char of String s2 at position count,
if they match count increases: count++;
If count has the length of String 2 all chars matched and true is returned.
there are two problems i can see in that code
1 for (int i = 1; i < s1.length(); i++) you are starting from index 1 but string indexes starts from 0
2 if (s1.charAt(i) != s1.charAt(i - 1)) here you are comparing characters of same strings s1 in other loop also this is the case
please fix these first, then ask again
this could be what you are searching for
public class Solution {
public static boolean checkSequence(String s1, String s2) {
for(char c : s2.toCharArray()) {
if(!s1.contains(c+"")) {
return false;
}
int pos = s1.indexOf(c);
s1 = s1.substring(pos);
}
return true;
}
}
Your approach to solve this problem can be something like this :
Find the smaller string.
Initialise the pointer to starting position of smaller string.
Iterate over the larger string in for loop and keep checking if character is matching.
On match increase the counter of smaller pointer.
while iterating keep checking if smaller pointer has reached to end or not. If yes then return true.
Something like this :
public static boolean checkSequence(String s1, String s2)
{
String smallerString = s1.length()<=s2.length() ? s1 : s2;
String largerString = smallerString.equals(s2) ? s1 : s2;
int smallerStringPointer=0;
for(int i=0;i<largerString.length();i++){
if(smallerString.charAt(smallerStringPointer) == largerString.charAt(i)){
smallerStringPointer++;
}
if(smallerStringPointer == smallerString.length()){
return true;
}
}
return false;
}
public static boolean usingLoops(String str1, String str2) {
int index = -10;
int flag = 0;
for (int i = 0; i < str1.length(); i++) {
flag = 0;
for (int j = i; j < str2.length(); j++) {
if (str1.charAt(i) == str2.charAt(j)) {
if (j < index) {
return false;
}
index = j;
flag = 1;
break;
}
}
if (flag == 0)
return false;
}
return true;
}
public static void main(String[] args) {
Scanner s = new Scanner(System.in);
String str1 = s.nextLine();
String str2 = s.nextLine();
// using loop to solve the problem
System.out.println(usingLoops(str1, str2));
s.close();
}

Separating compound and simple words

I know this problem is probably best served with DP, but I was wondering if it was possible to do it with recursion as a brute force way.
Given a set of words, say {"sales", "person", "salesperson"}, determine which words are compound (that is, it is the combination of 2 or more words in the list). So in this case, salesperson = sales + person, and is compound.
I based my answer heavily off of this problem: http://www.geeksforgeeks.org/dynamic-programming-set-32-word-break-problem/
public static void main(String args[]) throws Exception {
String[] test = { "salesperson", "sales", "person" };
String[] output = simpleWords(test);
for (int i = 0; i < output.length; i++)
System.out.println(output[i]);
}
static String[] simpleWords(String[] words) {
if (words == null || words.length == 0)
return null;
ArrayList<String> simpleWords = new ArrayList<String>();
for (int i = 0; i < words.length; i++) {
String word = words[i];
Boolean isCompoundWord = breakWords(words, word);
if (!isCompoundWord)
simpleWords.add(word);
}
String[] retVal = new String[simpleWords.size()];
for (int i = 0; i < simpleWords.size(); i++)
retVal[i] = simpleWords.get(i);
return retVal;
}
static boolean breakWords(String[] words, String word) {
int size = word.length();
if (size == 0 ) return true;
for (int j = 1; j <= size; j++) {
if (compareWords(words, word.substring(0, j)) && breakWords(words, word.substring(j, word.length()))) {
return true;
}
}
return false;
}
static boolean compareWords(String[] words, String word) {
for (int i = 0; i < words.length; i++) {
if (words[i].equals(word))
return true;
}
return false;
}
The problem here is now that while it successfully identifies salesperson as a compound word, it will also identify sales and person as a compound word. Can this code be revised so that this recursive solution works? I'm having trouble coming up with how I can easily do this.
Here is a solution with recursivity
public static String[] simpleWords(String[] data) {
List<String> list = new ArrayList<>();
for (String word : data) {
if (!isCompound(data, word)) {
list.add(word);
}
}
return list.toArray(new String[list.size()]);
}
public static boolean isCompound(String[] data, String word) {
return isCompound(data, word, 0);
}
public static boolean isCompound(String[] data, String word, int iteration) {
if (data == null || word == null || word.trim().isEmpty()) {
return false;
}
for (String str : data) {
if (str.equals(word) && iteration > 0) {
return true;
}
if (word.startsWith(str)) {
String subword = word.substring(str.length());
if (isCompound(data, subword, iteration + 1)) {
return true;
}
}
}
return false;
}
Just call it like this:
String[] data = {"sales", "person", "salesperson"};
System.out.println(Arrays.asList(simpleWords(data)));

finding a supersequence of DNA Java

I am struggling with a "find supersequence" algorithm.
The input is for set of strings
String A = "caagccacctacatca";
String B = "cgagccatccgtaaagttg";
String C = "agaacctgctaaatgctaga";
the result would be properly aligned set of strings (and next step should be merge)
String E = "ca ag cca cc ta cat c a";
String F = "c gag ccat ccgtaaa g tt g";
String G = " aga acc tgc taaatgc t a ga";
Thank you for any advice (I am sitting on this task for more than a day)
after merge the superstring would be
cagagaccatgccgtaaatgcattacga
The definition of supersequence in "this case" would be something like
The string R is contained in supersequence S if and only if all characters in a string R are present in supersequence S in the order in which they occur in the input sequence R.
The "solution" i tried (and again its the wrong way of doing it) is:
public class Solution4
{
static boolean[][] map = null;
static int size = 0;
public static void main(String[] args)
{
String A = "caagccacctacatca";
String B = "cgagccatccgtaaagttg";
String C = "agaacctgctaaatgctaga";
Stack data = new Stack();
data.push(A);
data.push(B);
data.push(C);
Stack clone1 = data.clone();
Stack clone2 = data.clone();
int length = 26;
size = max_size(data);
System.out.println(size+" "+length);
map = new boolean[26][size];
char[] result = new char[size];
HashSet<String> chunks = new HashSet<String>();
while(!clone1.isEmpty())
{
String a = clone1.pop();
char[] residue = make_residue(a);
System.out.println("---");
System.out.println("OLD : "+a);
System.out.println("RESIDUE : "+String.valueOf(residue));
String[] r = String.valueOf(residue).split(" ");
for(int i=0; i<r.length; i++)
{
if(r[i].equals(" ")) continue;
//chunks.add(spaces.substring(0,i)+r[i]);
chunks.add(r[i]);
}
}
for(String chunk : chunks)
{
System.out.println("CHUNK : "+chunk);
}
}
static char[] make_residue(String candidate)
{
char[] result = new char[size];
for(int i=0; i<candidate.length(); i++)
{
int pos = find_position_for(candidate.charAt(i),i);
for(int j=i; j<pos; j++) result[j]=' ';
if(pos==-1) result[candidate.length()-1] = candidate.charAt(i);
else result[pos] = candidate.charAt(i);
}
return result;
}
static int find_position_for(char character, int offset)
{
character-=((int)'a');
for(int i=offset; i<size; i++)
{
// System.out.println("checking "+String.valueOf((char)(character+((int)'a')))+" at "+i);
if(!map[character][i])
{
map[character][i]=true;
return i;
}
}
return -1;
}
static String move_right(String a, int from)
{
return a.substring(0, from)+" "+a.substring(from);
}
static boolean taken(int character, int position)
{ return map[character][position]; }
static void take(char character, int position)
{
//System.out.println("taking "+String.valueOf(character)+" at "+position+" (char_index-"+(character-((int)'a'))+")");
map[character-((int)'a')][position]=true;
}
static int max_size(Stack stack)
{
int max=0;
while(!stack.isEmpty())
{
String s = stack.pop();
if(s.length()>max) max=s.length();
}
return max;
}
}
Finding any common supersequence is not a difficult task:
In your example possible solution would be something like:
public class SuperSequenceTest {
public static void main(String[] args) {
String A = "caagccacctacatca";
String B = "cgagccatccgtaaagttg";
String C = "agaacctgctaaatgctaga";
int iA = 0;
int iB = 0;
int iC = 0;
char[] a = A.toCharArray();
char[] b = B.toCharArray();
char[] c = C.toCharArray();
StringBuilder sb = new StringBuilder();
while (iA < a.length || iB < b.length || iC < c.length) {
if (iA < a.length && iB < b.length && iC < c.length && (a[iA] == b[iB]) && (a[iA] == c[iC])) {
sb.append(a[iA]);
iA++;
iB++;
iC++;
}
else if (iA < a.length && iB < b.length && a[iA] == b[iB]) {
sb.append(a[iA]);
iA++;
iB++;
}
else if (iA < a.length && iC < c.length && a[iA] == c[iC]) {
sb.append(a[iA]);
iA++;
iC++;
}
else if (iB < b.length && iC < c.length && b[iB] == c[iC]) {
sb.append(b[iB]);
iB++;
iC++;
} else {
if (iC < c.length) {
sb.append(c[iC]);
iC++;
}
else if (iB < b.length) {
sb.append(b[iB]);
iB++;
} else if (iA < a.length) {
sb.append(a[iA]);
iA++;
}
}
}
System.out.println("SUPERSEQUENCE " + sb.toString());
}
}
However the real problem to solve is to find the solution for the known problem of Shortest Common Supersequence http://en.wikipedia.org/wiki/Shortest_common_supersequence,
which is not that easy.
There is a lot of researches which concern the topic.
See for instance:
http://www.csd.uwo.ca/~lila/pdfs/Towards%20a%20DNA%20solution%20to%20the%20Shortest%20Common%20Superstring%20Problem.pdf
http://www.ncbi.nlm.nih.gov/pubmed/14534185
You can try finding the shortest combination like this
static final char[] CHARS = "acgt".toCharArray();
public static void main(String[] ignored) {
String A = "caagccacctacatca";
String B = "cgagccatccgtaaagttg";
String C = "agaacctgctaaatgctaga";
String expected = "cagagaccatgccgtaaatgcattacga";
List<String> ABC = new Combination(A, B, C).findShortest();
System.out.println("expected: " + expected.length());
System.out.println("Merged: " + ABC.get(0).length() + " " + ABC);
}
static class Combination {
int shortest = Integer.MAX_VALUE;
List<String> shortestStr = new ArrayList<>();
char[][] chars;
int[] pos;
int count = 0;
Combination(String... strs) {
chars = new char[strs.length][];
pos = new int[strs.length];
for (int i = 0; i < strs.length; i++) {
chars[i] = strs[i].toCharArray();
}
}
public List<String> findShortest() {
findShortest0(new StringBuilder(), pos);
return shortestStr;
}
private void findShortest0(StringBuilder sb, int[] pos) {
if (allDone(pos)) {
if (sb.length() < shortest) {
shortestStr.clear();
shortest = sb.length();
}
if (sb.length() <= shortest)
shortestStr.add(sb.toString());
count++;
if (++count % 100 == 1)
System.out.println("Searched " + count + " shortest " + shortest);
return;
}
if (sb.length() + maxLeft(pos) > shortest)
return;
int[] pos2 = new int[pos.length];
int i = sb.length();
sb.append(' ');
for (char c : CHARS) {
if (!tryChar(pos, pos2, c)) continue;
sb.setCharAt(i, c);
findShortest0(sb, pos2);
}
sb.setLength(i);
}
private int maxLeft(int[] pos) {
int maxLeft = 0;
for (int i = 0; i < pos.length; i++) {
int left = chars[i].length - pos[i];
if (left > maxLeft)
maxLeft = left;
}
return maxLeft;
}
private boolean allDone(int[] pos) {
for (int i = 0; i < chars.length; i++)
if (pos[i] < chars[i].length)
return false;
return true;
}
private boolean tryChar(int[] pos, int[] pos2, char c) {
boolean matched = false;
for (int i = 0; i < chars.length; i++) {
pos2[i] = pos[i];
if (pos[i] >= chars[i].length) continue;
if (chars[i][pos[i]] == c) {
pos2[i]++;
matched = true;
}
}
return matched;
}
}
prints many solutions which are shorter than the one suggested.
expected: 28
Merged: 27 [acgaagccatccgctaaatgctatcga, acgaagccatccgctaaatgctatgca, acgaagccatccgctaacagtgctaga, acgaagccatccgctaacatgctatga, acgaagccatccgctaacatgcttaga, acgaagccatccgctaacatgtctaga, acgaagccatccgctacaagtgctaga, acgaagccatccgctacaatgctatga, acgaagccatccgctacaatgcttaga, acgaagccatccgctacaatgtctaga, acgaagccatcgcgtaaatgctatcga, acgaagccatcgcgtaaatgctatgca, acgaagccatcgcgtaacagtgctaga, acgaagccatcgcgtaacatgctatga, acgaagccatcgcgtaacatgcttaga, acgaagccatcgcgtaacatgtctaga, acgaagccatcgcgtacaagtgctaga, acgaagccatcgcgtacaatgctatga, acgaagccatcgcgtacaatgcttaga, acgaagccatcgcgtacaatgtctaga, acgaagccatgccgtaaatgctatcga, acgaagccatgccgtaaatgctatgca, acgaagccatgccgtaacagtgctaga, acgaagccatgccgtaacatgctatga, acgaagccatgccgtaacatgcttaga, acgaagccatgccgtaacatgtctaga, acgaagccatgccgtacaagtgctaga, acgaagccatgccgtacaatgctatga, acgaagccatgccgtacaatgcttaga, acgaagccatgccgtacaatgtctaga, cagaagccatccgctaaatgctatcga, cagaagccatccgctaaatgctatgca, cagaagccatccgctaacagtgctaga, cagaagccatccgctaacatgctatga, cagaagccatccgctaacatgcttaga, cagaagccatccgctaacatgtctaga, cagaagccatccgctacaagtgctaga, cagaagccatccgctacaatgctatga, cagaagccatccgctacaatgcttaga, cagaagccatccgctacaatgtctaga, cagaagccatcgcgtaaatgctatcga, cagaagccatcgcgtaaatgctatgca, cagaagccatcgcgtaacagtgctaga, cagaagccatcgcgtaacatgctatga, cagaagccatcgcgtaacatgcttaga, cagaagccatcgcgtaacatgtctaga, cagaagccatcgcgtacaagtgctaga, cagaagccatcgcgtacaatgctatga, cagaagccatcgcgtacaatgcttaga, cagaagccatcgcgtacaatgtctaga, cagaagccatgccgtaaatgctatcga, cagaagccatgccgtaaatgctatgca, cagaagccatgccgtaacagtgctaga, cagaagccatgccgtaacatgctatga, cagaagccatgccgtaacatgcttaga, cagaagccatgccgtaacatgtctaga, cagaagccatgccgtacaagtgctaga, cagaagccatgccgtacaatgctatga, cagaagccatgccgtacaatgcttaga, cagaagccatgccgtacaatgtctaga, cagagaccatccgctaaatgctatcga, cagagaccatccgctaaatgctatgca, cagagaccatccgctaacagtgctaga, cagagaccatccgctaacatgctatga, cagagaccatccgctaacatgcttaga, cagagaccatccgctaacatgtctaga, cagagaccatccgctacaagtgctaga, cagagaccatccgctacaatgctatga, cagagaccatccgctacaatgcttaga, cagagaccatccgctacaatgtctaga, cagagaccatcgcgtaaatgctatcga, cagagaccatcgcgtaaatgctatgca, cagagaccatcgcgtaacagtgctaga, cagagaccatcgcgtaacatgctatga, cagagaccatcgcgtaacatgcttaga, cagagaccatcgcgtaacatgtctaga, cagagaccatcgcgtacaagtgctaga, cagagaccatcgcgtacaatgctatga, cagagaccatcgcgtacaatgcttaga, cagagaccatcgcgtacaatgtctaga, cagagaccatgccgtaaatgctatcga, cagagaccatgccgtaaatgctatgca, cagagaccatgccgtaacagtgctaga, cagagaccatgccgtaacatgctatga, cagagaccatgccgtaacatgcttaga, cagagaccatgccgtaacatgtctaga, cagagaccatgccgtacaagtgctaga, cagagaccatgccgtacaatgctatga, cagagaccatgccgtacaatgcttaga, cagagaccatgccgtacaatgtctaga, cagagccatcctagctaaagtgctaga, cagagccatcctagctaaatgctatga, cagagccatcctagctaaatgcttaga, cagagccatcctagctaaatgtctaga, cagagccatcctgactaaagtgctaga, cagagccatcctgactaaatgctatga, cagagccatcctgactaaatgcttaga, cagagccatcctgactaaatgtctaga, cagagccatcctgctaaatgctatcga, cagagccatcctgctaaatgctatgca, cagagccatcctgctaacagtgctaga, cagagccatcctgctaacatgctatga, cagagccatcctgctaacatgcttaga, cagagccatcctgctaacatgtctaga, cagagccatcctgctacaagtgctaga, cagagccatcctgctacaatgctatga, cagagccatcctgctacaatgcttaga, cagagccatcctgctacaatgtctaga]

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