Where to deploy jars for a Domino Agent - java

I've an agent that use Axis jars.
Which are the alternatives for these jars deploying?
If I put them into lib/ext folder on server, everything works fine, but I wouldn't deploy "by hand" all jars in every production server.
If I put them into Archive agent section, also into WEB-INF/lib project folder, I always have a java.lang.ClassNotFoundException error.
UPDATE 1
I tried to deploy a jar into notesdata/domino/java folder and modified notes.ini JavaUserClasses variable to point to this jar, but same error!
UPDATE 2
As suggested, I put the jar (axiom-api-1.2.8.jar) into agent Archive, but still the same error
HTTP JVM: java.lang.NoClassDefFoundError: org.apache.axiom.om.OMNode
HTTP JVM: at java.lang.J9VMInternals.verifyImpl(Native Method)
HTTP JVM: at java.lang.J9VMInternals.verify(J9VMInternals.java:72)
HTTP JVM: at java.lang.J9VMInternals.verify(J9VMInternals.java:70)
HTTP JVM: at java.lang.J9VMInternals.initialize(J9VMInternals.java:134)
HTTP JVM: at org.apache.axis2.context.ConfigurationContextFactory.createBasicConfigurationContext(ConfigurationContextFactory.java:337)
HTTP JVM: at org.apache.axis2.context.ConfigurationContextFactory.createDefaultConfigurationContext(ConfigurationContextFactory.java:326)
HTTP JVM: at JavaAgent.NotesMain(JavaAgent.java:499)
HTTP JVM: at lotus.domino.AgentBase.runNotes(Unknown Source)
HTTP JVM: at lotus.domino.NotesThread.run(Unknown Source)

The right place to put jar is into agent's Archive section.
The problem experienced during my test following
HTTP JVM: java.lang.NoClassDefFoundError: org.apache.axiom.om.OMNode
doesn't depend on the axiom-api-1.2.8.jar absence, but on the absence of the whole jar dependencies.
Infact, including all jars needed, everything work's fine.
Thanks Knut for your suggestion.

Related

Wildfly org.jboss.nio -> FileNotFoundException: Invalid file path with Windows Java JDK 11.0.15+10

Since the update to Eclipse Tamurin JDK 11.0.15+10 we notice a problem as soon a HTTP request reaches Wildfly 20.0.1.Final. The same behaviour exsists in Wildfly 26.1.0.Final This only happens with the JDK Windows version, the Linux JDK works fine.
As it is an "Invalid file path" error, an OS dependent BUG seems possible.
Until now SAP Machine is the only JDK that does not encounter this failure.
I'm still not sure if this is a JDK or a Wildfly problem...
You can check that when opening the Wildfly Management Interface.
ERROR [io.undertow.request] (External Management Request Threads -- 1) UT005071: Undertow request failed HttpServerExchange{ GET /management}: java.io.IOError: java.io.FileNotFoundException: Invalid file path
at org.jboss.xnio#3.8.1.Final//org.xnio.channels.Channels$4.run(Channels.java:1103)
at org.jboss.xnio#3.8.1.Final//org.xnio.channels.Channels$4.run(Channels.java:1093)
at java.base/java.security.AccessController.doPrivileged(Native Method)
at org.jboss.xnio#3.8.1.Final//org.xnio.channels.Channels.<clinit>(Channels.java:1093)
at io.undertow.core#2.1.3.Final//io.undertow.io.UndertowOutputStream.write(UndertowOutputStream.java:231)
at io.undertow.core#2.1.3.Final//io.undertow.io.BlockingSenderImpl.writeBuffer(BlockingSenderImpl.java:245)
at io.undertow.core#2.1.3.Final//io.undertow.io.BlockingSenderImpl.writeBuffer(BlockingSenderImpl.java:238)
at io.undertow.core#2.1.3.Final//io.undertow.io.BlockingSenderImpl.send(BlockingSenderImpl.java:75)
at io.undertow.core#2.1.3.Final//io.undertow.io.BlockingSenderImpl.send(BlockingSenderImpl.java:107)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.DomainUtil.writeResponse(DomainUtil.java:89)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.DomainApiHandler$1.doSendResponse(DomainApiHandler.java:177)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.ResponseCallback.sendResponse(ResponseCallback.java:32)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.DomainApiHandler.handleRequest(DomainApiHandler.java:232)
at io.undertow.core#2.1.3.Final//io.undertow.server.handlers.encoding.EncodingHandler.handleRequest(EncodingHandler.java:72)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.DomainApiCheckHandler.handleRequest(DomainApiCheckHandler.java:91)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.security.ElytronIdentityHandler.lambda$handleRequest$0(ElytronIdentityHandler.java:62)
at org.wildfly.security.elytron-private#1.12.1.Final//org.wildfly.security.auth.server.SecurityIdentity.runAs(SecurityIdentity.java:328)
at org.wildfly.security.elytron-private#1.12.1.Final//org.wildfly.security.auth.server.SecurityIdentity.runAs(SecurityIdentity.java:285)
at org.jboss.as.controller#12.0.3.Final//org.jboss.as.controller.AccessAuditContext.doAs(AccessAuditContext.java:254)
at org.jboss.as.controller#12.0.3.Final//org.jboss.as.controller.AccessAuditContext.doAs(AccessAuditContext.java:225)
at org.jboss.as.domain-http-interface#12.0.3.Final//org.jboss.as.domain.http.server.security.ElytronIdentityHandler.handleRequest(ElytronIdentityHandler.java:61)
at io.undertow.core#2.1.3.Final//io.undertow.server.handlers.BlockingHandler.handleRequest(BlockingHandler.java:56)
at io.undertow.core#2.1.3.Final//io.undertow.server.Connectors.executeRootHandler(Connectors.java:370)
at io.undertow.core#2.1.3.Final//io.undertow.server.HttpServerExchange$1.run(HttpServerExchange.java:830)
at org.jboss.threads#2.3.3.Final//org.jboss.threads.ContextClassLoaderSavingRunnable.run(ContextClassLoaderSavingRunnable.java:35)
at org.jboss.threads#2.3.3.Final//org.jboss.threads.EnhancedQueueExecutor.safeRun(EnhancedQueueExecutor.java:1982)
at org.jboss.threads#2.3.3.Final//org.jboss.threads.EnhancedQueueExecutor$ThreadBody.doRunTask(EnhancedQueueExecutor.java:1486)
at org.jboss.threads#2.3.3.Final//org.jboss.threads.EnhancedQueueExecutor$ThreadBody.run(EnhancedQueueExecutor.java:1348)
at java.base/java.lang.Thread.run(Thread.java:829)
at org.jboss.threads#2.3.3.Final//org.jboss.threads.JBossThread.run(JBossThread.java:485)
Caused by: java.io.FileNotFoundException: Invalid file path
at java.base/java.io.FileOutputStream.<init>(FileOutputStream.java:231)
at java.base/java.io.FileOutputStream.<init>(FileOutputStream.java:126)
at org.jboss.xnio#3.8.1.Final//org.xnio.channels.Channels$4.run(Channels.java:1098)
... 29 more
JDK
Works with Wildfly
Eclipse Tamurin
no
Amazon Coretto
no
Azul Zulu
no
Bellsoft
no
Oracle OpenJDK
no
Oracle JDK
no
SAP Machine
yes
This is an issue in the JDK. You can wait for JDK 11.0.16 or downgrade to a lower version like JDK 11.0.14.
This is caused by a known JDK bug. You can work around the issue by setting Djdk.io.File.enableADS system property. In Intellij go to Run -> Edit configurations and paste -Djdk.io.File.enableADS=true in VM Options field.

Tomcat9 complaining on class not found for javax.sql.DataSource class

Tomcat9 running on a Linux based VM, startup giving following error, when a Jdk11 compiled war file is deployed in tomcat. On start of tomcat following error occurs. How to resolve this class not found exception. Is specific module java.sql to be added explicitly?
Jul 22, 2020 1:49:45 AM org.apache.catalina.startup.Catalina start
SEVERE: The required Server component failed to start so Tomcat is unable to start.
org.apache.catalina.LifecycleException: Failed to start component [StandardServer[43004]]
at org.apache.catalina.util.LifecycleBase.handleSubClassException(LifecycleBase.java:440)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:198)
at org.apache.catalina.startup.Catalina.start(Catalina.java:633)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:343)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:474)
Caused by: java.lang.NoClassDefFoundError: javax/sql/DataSource
at java.base/java.lang.ClassLoader.findBootstrapClass(Native Method)
at java.base/java.lang.ClassLoader.findBootstrapClassOrNull(ClassLoader.java:1258)
at java.base/java.lang.System$2.findBootstrapClassOrNull(System.java:2131)
at java.base/jdk.internal.loader.ClassLoaders$BootClassLoader.loadClassOrNull(ClassLoaders.java:118)
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClassOrNull(BuiltinClassLoader.java:616)
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClassOrNull(BuiltinClassLoader.java:640)
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClassOrNull(BuiltinClassLoader.java:616)
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:579)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:178)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:576)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:522)
at java.base/java.lang.ClassLoader.defineClass1(Native Method)
I have tried adding '--add-modules java.sql' in the tomcat startup script. But still no difference. Also one strange thing is that when '-verbose:module' option is added it clearly shows that module java.sql is loaded, but still ends up with NoClassDefFoundError: javax/sql/DataSource.
find /usr/lib/jvm/adoptopenjdk-11-hotspot -name java.sql.jmod -exec jar tf '{}' \; | grep DataSource
classes/javax/sql/XADataSource.class
classes/javax/sql/ConnectionPoolDataSource.class
classes/javax/sql/DataSource.class
classes/javax/sql/CommonDataSource.class
java version :
$ java -version
openjdk version "11.0.7" 2020-04-14
OpenJDK Runtime Environment AdoptOpenJDK (build 11.0.7+10)
OpenJDK 64-Bit Server VM AdoptOpenJDK (build 11.0.7+10, mixed mode)
We have following block in server.xml
<Resource
name="jdbc/ILOraclePool"
auth="Container"
factory="com.xyz.tomcat.ucp.UcpDataSourceFactory" (this class extends oracle.ucp.jdbc.PoolDataSourceImpl)
type="oracle.ucp.jdbc.PoolDataSource"
description="main DB"
connectionFactoryClassName="oracle.jdbc.pool.OracleDataSource"
....
/>
First ensure that Oracle JDBC jar ojdbc8.jar, ucp.jar, and ons.jar from the same version (e.g. version 12.2) are present in $CATALINA_HOME/lib. Make sure that all three jar files are from the same database version. DO NOT mix the version of these jars. Always, try to use the latest JDBC driver and UCP in order to leverage the latest capabilities and performance improvements.
Also, I recommend you change the factory class to oracle.ucp.jdbc.PoolDataSourceImpl.
Hopefully, this should resolve the problem. In case it doesn't help, please post the JNDI lookup code and the DataSource configuration in web.xml.
I think tomcat is using some other JVM. Check that.
Open catalina.sh present in tomcat9/bin directory and export JAVA_HOME.
export JAVA_HOME=/usr/lib/jvm/adoptopenjdk-11-hotspot
For the managed resources in the application servers, it is better to copy the related libs(eg. the JDBC drivers) to the application server specific libs folder(eg. the Tomcat's catalina/lib, Glassfish's domains/yourdomain/lib etc) and registered it a host/domain scope or globally in the server config file.
As I know, some JDBC drivers do not work when it is packaged into the deployable war that is deployed into Tomcat. And when using Glassfish, Wildfly, etc., I always used the server tools(UI, CLI, Maven plugin, etc.) to register JDBC/Datasource related resources in the server config.
Update: I created a new repo to demo this usage in Spring Boot, check here.
oracle-jndi-ds-jar run as Spring Boot jar.
oracle-jndi-ds-war run as war in an external Apache Tomcat.
Both included an IT test on Java 11, Oracle XE 18.4.0, JNDI DataSource.
mvn verify -Pit
Have you tried moving the to context.xml ? Check out the Tomcat_Servlet code sample.

Tomcat not running for a JAR file

I am using Postman alongside a JAR file that runs a REST service that holds some contacts. However when I try to run the JAR file by using: java -jar ContactListRESTService.jar in Powershell, I am seeing a bunch of errors that Apache Tomcat could not run. Postman also doesn't recognize the localhost.
Caused by: java.lang.IllegalStateException: Tomcat connector in failed state
at org.springframework.boot.context.embedded.tomcat.TomcatEmbeddedServletContainer.start(TomcatEmbeddedServletContainer.java:159)
Caused by: java.lang.IllegalStateException: Tomcat connector in failed state
at org.springframework.boot.context.embedded.tomcat.TomcatEmbeddedServletContainer.start(TomcatEmbeddedServletCntainer.java:159) ~[spring-boot 1.3.7.RELEASE.jar!/:1.3.7.RELEASE]
I have tried uninstalling and reinstalling JAVA SE per some guidance from a mentor with no results.
If anyone can point me in the right direction please.

Java NoSuchMethodError when connecting via JDBC to Hive

I'm getting the following error when attempting to connect to Hive from a simple java program in Eclipse. It looks like it connects then throws this error. I can connect to Hive Thrift server locally through beeline without issues.
both libthrift .jar files are 0.9.2. Same on client and server. Version for server and client for the following .jar files are the same:
hive-jdbc*.jar 1.2.0
hive-service*.jar 1.2.0
libfb303-0.9.0.jar 0.9.2
libthrift-0.9.0.jar 0.9.2
log4j-1.2.16.jar 1.2.16
slf4j-api-1.6.1.jar 1.7.5
slf4j-log4j12-1.6.1.jar 1.7.5
commons-logging-1.0.4.jar 1.1.3
Exception in thread "main" java.lang.NoSuchMethodError: org.apache.thrift.protocol.TProtocol.getScheme()Ljava/lang/Class;
at org.apache.hive.service.cli.thrift.TCLIService$OpenSession_args.write(TCLIService.java:1854)
at org.apache.thrift.TServiceClient.sendBase(TServiceClient.java:63)
at org.apache.hive.service.cli.thrift.TCLIService$Client.send_OpenSession(TCLIService.java:150)
at org.apache.hive.service.cli.thrift.TCLIService$Client.OpenSession(TCLIService.java:142)
at org.apache.hive.jdbc.HiveConnection.openSession(HiveConnection.java:578)
at org.apache.hive.jdbc.HiveConnection.<init>(HiveConnection.java:192)
at org.apache.hive.jdbc.HiveDriver.connect(HiveDriver.java:105)
at java.sql.DriverManager.getConnection(Unknown Source)
at java.sql.DriverManager.getConnection(Unknown Source)
The libthrift version I am using is listed by Apache as having the getScheme() method.
Any help would be greatly appreciated!
Make sure you have included the required jar files on your classpath. As you said its working on your local then I guess you did. If its not working on the actual server then make sure you have deployed the required jars.

Axis 1.4 log4j-1.2.8.jar incompatible with XPages?

I'm trying to add some of the JARs from Apache Axis 1.4 into the WebContent/WEB-INF/lib directory. One of the JARs is log4j-1.2.8.jar.
As soon as this JAR is added to the lib directory, all XPages in the NSF stop working. I just get an error 500 with the following message:
"HTTP Web Server: Command Not Handled Exception".
The following message is written to the error log:
java.lang.RuntimeException: com.ibm.xsp.FacesExceptionEx: org.apache.commons.logging.LogConfigurationException: java.lang.reflect.InvocationTargetException
.
.
.
.
Caused by: java.lang.NoClassDefFoundError: org/apache/log4j/Logger
at org.apache.commons.logging.impl.Log4JLogger.<init>(Log4JLogger.java:102)
Link to full stack trace
Does anyone have any ideas?
edited
The AXIS jars are included in Domino install because Domino Web Services use them. That's why there is a conflict if you include them also.
I would recommend using JAX-WS which is newer than Axis. Here is how to use it for Web Service client. No need to add any JARs. You could also use JAX-WS wsdl2java instead of Apache one.
These two permissions need to be granted in java.policy file for this to work:
permission java.lang.RuntimePermission "setContextClassLoader";
permission java.lang.reflect.ReflectPermission "suppressAccessChecks";
Note that any kind of server update (f.e. fixpack install) will reset the java.policy file to default.

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