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java.lang.ClassNotFoundException: com.jdbc.mysql.Driver occuring even after adding java connector jar file [duplicate]

I was working with Spring Boot project, and suddenly I faced with an issue that application can not load MySQL jdbc.(I compiled this project once without changing anything) This is my pom.xml:
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.5.9.RELEASE</version>
</parent>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<!-- <scope>runtime</scope> I tried this too -->
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
<exclusions>
<exclusion>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-entitymanager</artifactId>
</exclusion>
<exclusion>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.google.code.gson</groupId>
<artifactId>gson</artifactId>
<version>2.8.2</version>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>5.2.10.Final</version>
</dependency>
</dependencies>
This is my application.properties:
spring.datasource.driver-class-name=com.mysql.jdbc.Driver
spring.datasource.url=jdbc:mysql://localhost/PROJECT_NAME?useUnicode=yes&characterEncoding=UTF-8
spring.datasource.username=root
spring.datasource.password=password
Logcat:
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dataSource' defined in class path resource [org/springframework/boot/autoconfigure/jdbc/DataSourceConfiguration$Tomcat.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.apache.tomcat.jdbc.pool.DataSource]: Factory method 'dataSource' threw exception; nested exception is java.lang.IllegalStateException: Cannot load driver class: com.mysql.jdbc.Driver
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:599) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
... 26 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.apache.tomcat.jdbc.pool.DataSource]: Factory method 'dataSource' threw exception; nested exception is java.lang.IllegalStateException: Cannot load driver class: com.mysql.jdbc.Driver
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:189) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
... 39 common frames omitted
Caused by: java.lang.IllegalStateException: Cannot load driver class: com.mysql.jdbc.Driver
at org.springframework.util.Assert.state(Assert.java:70) ~[spring-core-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.boot.autoconfigure.jdbc.DataSourceProperties.determineDriverClassName(DataSourceProperties.java:232) ~[spring-boot-autoconfigure-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.autoconfigure.jdbc.DataSourceProperties.initializeDataSourceBuilder(DataSourceProperties.java:184) ~[spring-boot-autoconfigure-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.autoconfigure.jdbc.DataSourceConfiguration.createDataSource(DataSourceConfiguration.java:42) ~[spring-boot-autoconfigure-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.autoconfigure.jdbc.DataSourceConfiguration$Tomcat.dataSource(DataSourceConfiguration.java:56) ~[spring-boot-autoconfigure-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_161]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_161]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_161]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_161]
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
... 40 common frames omitted
MySQL database is created with hibernate at first. These configurations worked fine but I am not sure what is the real problem here
EDIT : I removed .m2 folder and install all dependencies from beginning as well.

You need to add version to MySQL connector dependency and you need to change the
spring.datasource.driver-class-name
property.
MySQL changed the driver from
com.mysql.jdbc.Driver
to
com.mysql.cj.jdbc.Driver
You are missing the .cj. (This is for connector version above 5.* I think.
Hope this helps.
Cannot load driver class: com.mysql.jdbc.Driver
clearly states that Hibernate could not find the jdbc driver.

In addition to changing the driver class name as noted above
spring.datasource.driverClassName = com.mysql.cj.jdbc.Driver
I also had to modify my pom.xml from
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<scope>provided</scope>
</dependency>
to
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<version>8.0.14</version>
</dependency>
to make sure the driver is present and have the message disappear.

This issue is resolved by changing your spring.datasource.driverClassName content and adding .cj into it, as Kristijan Rusu said.
spring.datasource.driverClassName = com.mysql.cj.jdbc.Driver

change mysql dependency version to 8.0.14..it works for me
and spring.datasource.driver-class-name=com.mysql.cj.jdbc.Driver
in application.properties

This is issue resolved after the below property corrected.
spring.datasource.driver-class-name=com.mysql.cj.jdbc.Driver

I had same problem. Resolved it by changing in pom.xml
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.0.2.RELEASE</version>
<relativePath /> <!-- lookup parent from repository -->
</parent>
to
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.3.2.RELEASE</version>
<relativePath /> <!-- lookup parent from repository -->
</parent>
and adding in application.properties
spring.datasource.driver-class-name=com.mysql.cj.jdbc.Driver
spring.datasource.url=jdbc:mysql://localhost:3306/myproject

Error when configuring the Sql server 2019 database in Spring boot 2

file Application.properties
spring.datasource.url=jdbc:sqlserver://localhost:1433;databaseName=pim
spring.datasource.username=sa
spring.datasource.password=
spring.datasource.driverClassName=com.microsoft.sqlserver.jdbc.SQLServerDriver
spring.jpa.show-sql=false
spring.jpa.properties.hibernate.dialect=org.hibernate.dialect.SQLServer2012Dialect
spring.jpa.hibernate.ddl-auto = create
file pom.xml
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.3.4.RELEASE</version>
<relativePath /> <!-- lookup parent from repository -->
</parent>
<groupId>com.pimunip</groupId>
<artifactId>unipPim</artifactId>
<version>0.0.1-SNAPSHOT</version>
<name>unipPim</name>
<description>Demo project for Spring Boot</description>
<properties>
<java.version>11</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>javax.validation</groupId>
<artifactId>validation-api</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-validator</artifactId>
<version>6.1.5.Final</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
<exclusions>
<exclusion>
<groupId>org.junit.vintage</groupId>
<artifactId>junit-vintage-engine</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>com.h2database</groupId>
<artifactId>h2</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-devtools</artifactId>
</dependency>
<dependency>
<groupId>com.microsoft.sqlserver</groupId>
<artifactId>mssql-jdbc</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-mail</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-thymeleaf</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-security</artifactId>
</dependency>
<dependency>
<groupId>io.jsonwebtoken</groupId>
<artifactId>jjwt</artifactId>
<version>0.9.1</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
</project>
ERROR
ror starting ApplicationContext. To display the conditions report re-run your application with 'debug' enabled.
2020-11-04 13:23:07.752 ERROR 8876 --- [ restartedMain] o.s.boot.SpringApplication : Application run failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'instantiateDatabase' defined in class path resource [com/pimunip/lucas/config/DevConfig.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [boolean]: Factory method 'instantiateDatabase' threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'categoriaRepository' defined in com.pimunip.lucas.repositories.CategoriaRepository defined in #EnableJpaRepositories declared on JpaRepositoriesRegistrar.EnableJpaRepositoriesConfiguration: Cannot resolve reference to bean 'jpaMappingContext' while setting bean property 'mappingContext'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaMappingContext': Invocation of init method failed; nested exception is org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment]
at org.springframework.beans.factory.support.ConstructorResolver.instantiate(ConstructorResolver.java:655) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:483) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1336) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1176) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:556) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:516) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:324) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:322) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:897) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:879) ~[spring-context-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:551) ~[spring-context-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:143) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:758) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:750) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:397) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1237) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1226) ~[spring-boot-2.3.4.RELEASE.jar:2.3.4.RELEASE]
at com.pimunip.lucas.UnipPimApplication.main(UnipPimApplication.java:13) ~[classes/:na]
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:na]
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:na]
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:na]
at java.base/java.lang.reflect.Method.invoke(Method.java:566) ~[na:na]
at org.springframework.boot.devtools.restart.RestartLauncher.run(RestartLauncher.java:49) ~[spring-boot-devtools-2.3.4.RELEASE.jar:2.3.4.RELEASE]
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [boolean]: Factory method 'instantiateDatabase' threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'categoriaRepository' defined in com.pimunip.lucas.repositories.CategoriaRepository defined in #EnableJpaRepositories declared on JpaRepositoriesRegistrar.EnableJpaRepositoriesConfiguration: Cannot resolve reference to bean 'jpaMappingContext' while setting bean property 'mappingContext'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaMappingContext': Invocation of init method failed; nested exception is org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment]
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:185) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiate(ConstructorResolver.java:650) ~[spring-beans-5.2.9.RELEASE.jar:5.2.9.RELEASE]
... 25 common frames omitted

Open SQL Server Configuration Manager(Search from windows toolbar search), and then expand SQL Server 2019 Network Configuration.
Click Protocols for InstanceName, and
then make sure TCP/IP is enabled in the right panel and double-click
TCP/IP and also notice the value of the Listen All item.
Click the IP Addresses tab:
If the value of Listen All is yes,
the TCP/IP port number for this instance of SQL Server 2019 should be 1433.
Click OK
Restart the MS SQL Instance from service.

Error creating bean with name 'entityManagerFactory' on Spring Boot project

When I run my spring boot project I get this error:
Error starting ApplicationContext. To display the auto-configuration report re-run your application with 'debug' enabled.
[2m2018-01-15 20:12:06.097[0;39m [31mERROR[0;39m [35m5110[0;39m [2m---[0;39m [2m[ restartedMain][0;39m [36mo.s.boot.SpringApplication [0;39m [2m:[0;39m Application startup failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Invocation of init method failed; nested exception is javax.persistence.PersistenceException: [PersistenceUnit: default] Unable to build Hibernate SessionFactory
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1628) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:555) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1080) ~[spring-context-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:857) ~[spring-context-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:543) ~[spring-context-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) ~[spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:693) [spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:360) [spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:303) [spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1118) [spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1107) [spring-boot-1.5.9.RELEASE.jar:1.5.9.RELEASE]
at com.example.demo.EasyNotesApplication.main(EasyNotesApplication.java:12) [classes/:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_151]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_151]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_151]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_151]
at org.springframework.boot.devtools.restart.RestartLauncher.run(RestartLauncher.java:49) [spring-boot-devtools-1.5.9.RELEASE.jar:1.5.9.RELEASE]
Caused by: javax.persistence.PersistenceException: [PersistenceUnit: default] Unable to build Hibernate SessionFactory
at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.persistenceException(EntityManagerFactoryBuilderImpl.java:954) ~[hibernate-entitymanager-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.build(EntityManagerFactoryBuilderImpl.java:882) ~[hibernate-entitymanager-5.0.12.Final.jar:5.0.12.Final]
at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:60) ~[spring-orm-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:360) ~[spring-orm-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:382) ~[spring-orm-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:371) ~[spring-orm-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:336) ~[spring-orm-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1687) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1624) ~[spring-beans-4.3.13.RELEASE.jar:4.3.13.RELEASE]
... 21 common frames omitted
Caused by: org.hibernate.tool.schema.spi.SchemaManagementException: Unable to execute schema management to JDBC target [alter table notes add column created_at datetime not null]
at org.hibernate.tool.schema.internal.TargetDatabaseImpl.accept(TargetDatabaseImpl.java:59) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.schema.internal.SchemaMigratorImpl.applySqlString(SchemaMigratorImpl.java:431) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.schema.internal.SchemaMigratorImpl.applySqlStrings(SchemaMigratorImpl.java:449) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.schema.internal.SchemaMigratorImpl.migrateTable(SchemaMigratorImpl.java:253) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.schema.internal.SchemaMigratorImpl.doMigrationToTargets(SchemaMigratorImpl.java:170) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.schema.internal.SchemaMigratorImpl.doMigration(SchemaMigratorImpl.java:60) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.hbm2ddl.SchemaUpdate.execute(SchemaUpdate.java:134) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.tool.hbm2ddl.SchemaUpdate.execute(SchemaUpdate.java:101) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.internal.SessionFactoryImpl.<init>(SessionFactoryImpl.java:472) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.boot.internal.SessionFactoryBuilderImpl.build(SessionFactoryBuilderImpl.java:444) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.build(EntityManagerFactoryBuilderImpl.java:879) ~[hibernate-entitymanager-5.0.12.Final.jar:5.0.12.Final]
... 28 common frames omitted
Caused by: com.mysql.jdbc.MysqlDataTruncation: Data truncation: Incorrect datetime value: '0000-00-00 00:00:00' for column 'created_at' at row 1
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3971) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3909) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2527) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2680) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2483) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.StatementImpl.executeUpdateInternal(StatementImpl.java:1552) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.StatementImpl.executeLargeUpdate(StatementImpl.java:2607) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at com.mysql.jdbc.StatementImpl.executeUpdate(StatementImpl.java:1480) ~[mysql-connector-java-5.1.44.jar:5.1.44]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_151]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_151]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_151]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_151]
at org.apache.tomcat.jdbc.pool.StatementFacade$StatementProxy.invoke(StatementFacade.java:114) ~[tomcat-jdbc-8.5.23.jar:na]
at com.sun.proxy.$Proxy97.executeUpdate(Unknown Source) ~[na:na]
at org.hibernate.tool.schema.internal.TargetDatabaseImpl.accept(TargetDatabaseImpl.java:56) ~[hibernate-core-5.0.12.Final.jar:5.0.12.Final]
... 38 common frames omitted
I added entity-manager an hibernate.core libraries ,this is my pom.xml
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.example</groupId>
<artifactId>easy-notes</artifactId>
<version>0.0.1-SNAPSHOT</version>
<packaging>jar</packaging>
<name>easy-notes</name>
<description>Demo project for Spring Boot</description>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.5.9.RELEASE</version>
<relativePath /> <!-- lookup parent from repository -->
</parent>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-devtools</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<!-- https://mvnrepository.com/artifact/org.springframework/spring-jdbc -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jdbc</artifactId>
</dependency>
<!-- https://mvnrepository.com/artifact/org.hibernate/hibernate-core -->
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-entitymanager</artifactId>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
</project>
But I still have the same error when I try to start , I thought that I missed the libraries buy the problem is still there, Do I missed some other library or something?The version of hibernate-core and entity manager is 5.0.12 for both

Caused by: com.mysql.jdbc.MysqlDataTruncation: Data truncation: Incorrect datetime value: '0000-00-00 00:00:00' for column 'created_at' at row 1
In error details, you are getting Incorrect datetime value: '0000-00-00 00:00:00' at notes table for column 'created_at'.
You should change NO_ZERO_DATE sql mode in mysql.

Spring Boot + Spring Data JPA + H2:Error creating bean with name 'entityManagerFactory' defined in class path resource

I am new to Spring Boot and Maven and I am trying to run a simple project based from the Spring Data JPA guide but I am getting the following error. I have checked all over the forum but I couldn't find a solution that fit my problem. In the pom file posted, I already see these dependencies in the Effective POM tab in STS with the version numbers, which comes from what is in the tag of the pom file posted so I am not sure why I still have to put them into the pom file I posted as well. Does anyone know what I am missing or doing wrong here?
I am getting the following:
Error starting ApplicationContext. To display the auto-configuration report re-run your application with 'debug' enabled.
2017-06-12 23:14:30.076 ERROR 14936 --- [ main] o.s.boot.SpringApplication : Application startup failed
org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactory' parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactoryBuilder' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactoryBuilder' parameter 0; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:749) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:467) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) ~[spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:737) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:370) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:314) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1162) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1151) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at com.sample.Main.main(Main.java:27) [classes/:na]
Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactoryBuilder' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactoryBuilder' parameter 0; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:749) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:467) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 19 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:599) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 33 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:189) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 46 common frames omitted
Caused by: java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.orm.jpa.vendor.HibernateJpaVendorAdapter.<init>(HibernateJpaVendorAdapter.java:64) ~[spring-orm-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration.createJpaVendorAdapter(HibernateJpaAutoConfiguration.java:98) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.JpaBaseConfiguration.jpaVendorAdapter(JpaBaseConfiguration.java:103) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$5a3bc59a.CGLIB$jpaVendorAdapter$4(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$5a3bc59a$$FastClassBySpringCGLIB$$ec13a313.invoke(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:228) ~[spring-core-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:358) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$5a3bc59a.jpaVendorAdapter(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_45]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_45]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_45]
at java.lang.reflect.Method.invoke(Method.java:497) ~[na:1.8.0_45]
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 47 common frames omitted
Caused by: java.lang.ClassNotFoundException: org.hibernate.HibernateException
at java.net.URLClassLoader.findClass(URLClassLoader.java:381) ~[na:1.8.0_45]
at java.lang.ClassLoader.loadClass(ClassLoader.java:424) ~[na:1.8.0_45]
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331) ~[na:1.8.0_45]
at java.lang.ClassLoader.loadClass(ClassLoader.java:357) ~[na:1.8.0_45]
... 60 common frames omitted
Application Start
package com.sample;
import java.util.Arrays;
import java.util.Collection;
import javax.persistence.Entity;
import javax.persistence.GeneratedValue;
import javax.persistence.Id;
import org.springframework.boot.CommandLineRunner;
import org.springframework.boot.SpringApplication;
import org.springframework.boot.autoconfigure.SpringBootApplication;
import org.springframework.context.annotation.Bean;
import org.springframework.data.jpa.repository.JpaRepository;
#SpringBootApplication
public class Main {
public static void main(String[] args) throws Exception {
SpringApplication.run(Main.class, args);
}
#Bean
CommandLineRunner runner(StudentRepository student){
return args ->{
Arrays.asList("John, Cathy, David, Jeff".split(","))
.forEach(s -> student.save(new Student(s)));
student.findAll().forEach(System.out::println);
student.findByName("John").forEach(System.out::println);
};
}
}
interface StudentRepository extends JpaRepository<Student, Long> {
//select * from student where name = :name
Collection<Student> findByName(String name);
}
//JPA Entity will be mapped to a table named Student.
#Entity
class Student {
#Id
#GeneratedValue
private Long id;
private String name;
//for JPA, you don't use it directly
protected Student() {
}
public Student(String name) {
this.name = name;
}
public Long getId() {
return id;
}
public String getName() {
return name;
}
#Override
public String toString() {
return "Student [id=" + id + ", name=" + name + "]";
}
}
pom.xml
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.spring.sample.projects</groupId>
<artifactId>SpringBootSample</artifactId>
<packaging>jar</packaging>
<version>1.0.0-SNAPSHOT</version>
<name>SpringBootSample</name>
<url>http://maven.apache.org</url>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.5.3.RELEASE</version>
</parent>
<properties>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>com.h2database</groupId>
<artifactId>h2</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-entitymanager</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate.javax.persistence</groupId>
<artifactId>hibernate-jpa-2.1-api</artifactId>
<version>1.0.0.Final</version>
</dependency>
<dependency>
<groupId>org.springframework.data</groupId>
<artifactId>spring-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<finalName>SpringBootSample</finalName>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>spring-releases</id>
<name>Spring Releases</name>
<url>https://repo.spring.io/libs-release</url>
</repository>
<repository>
<id>org.jboss.repository.releases</id>
<name>JBoss Maven Release Repository</name>
<url>https://repository.jboss.org/nexus/content/repositories/releases</url>
</repository>
</repositories>
<pluginRepositories>
<pluginRepository>
<id>spring-releases</id>
<name>Spring Releases</name>
<url>https://repo.spring.io/libs-release</url>
</pluginRepository>
</pluginRepositories>
</project>

You are missing this class Caused by: java.lang.ClassNotFoundException: org.hibernate.HibernateException in your classpath.

Suppose you pom.xml should be modified like this. It contains dependencies.
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.spring.sample.projects</groupId>
<artifactId>SpringBootSample</artifactId>
<packaging>jar</packaging>
<version>1.0.0-SNAPSHOT</version>
<name>SpringBootSample</name>
<url>http://maven.apache.org</url>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.5.3.RELEASE</version>
</parent>
<properties>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>com.h2database</groupId>
<artifactId>h2</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<finalName>SpringBootSample</finalName>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>spring-releases</id>
<name>Spring Releases</name>
<url>https://repo.spring.io/libs-release</url>
</repository>
<repository>
<id>org.jboss.repository.releases</id>
<name>JBoss Maven Release Repository</name>
<url>https://repository.jboss.org/nexus/content/repositories/releases</url>
</repository>
</repositories>
<pluginRepositories>
<pluginRepository>
<id>spring-releases</id>
<name>Spring Releases</name>
<url>https://repo.spring.io/libs-release</url>
</pluginRepository>
</pluginRepositories>
</project>

I found the answer. I had to explicitly use an new dependency for hibernate-core for spring boot 1.5.4. The 4.2.x version works as well, but I wanted to go with the newer one.
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>5.2.10.Final</version>
</dependency>

I think you have some cross references, in this case you can access relational data using JDBC
change this dependency in your pom.xml
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
For this
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-jdbc</artifactId>
</dependency>

Accessing data in spring boot with mysql database

I used spring sts to import this project: https://spring.io/guides/gs/accessing-data-mysql/
When I tried to run it I got this meassage
2017-05-24 18:51:38.158 INFO 20193 --- [ main] hello.Application : Starting Application on NCPU01 with PID 193 (/home/user/Documents/workspace-sts-3.8.4.RELEASE/gs-accessing-data-mysql-complete/target/classes started by user in /home/user/Documents/workspace-sts-3.8.4.RELEASE/gs-accessing-data-mysql-complete)
2017-05-24 18:51:38.163 INFO 20193 --- [ main] hello.Application : No active profile set, falling back to default profiles: default
2017-05-24 18:51:38.255 INFO 20193 --- [ main] ationConfigEmbeddedWebApplicationContext : Refreshing org.springframework.boot.context.embedded.AnnotationConfigEmbeddedWebApplicationContext#3ffcd140: startup date [Wed May 24 18:51:38 IST 2017]; root of context hierarchy
2017-05-24 18:51:41.395 INFO 20193 --- [ main] s.b.c.e.t.TomcatEmbeddedServletContainer : Tomcat initialized with port(s): 8080 (http)
2017-05-24 18:51:41.415 INFO 20193 --- [ main] o.apache.catalina.core.StandardService : Starting service Tomcat
2017-05-24 18:51:41.417 INFO 20193 --- [ main] org.apache.catalina.core.StandardEngine : Starting Servlet Engine: Apache Tomcat/8.5.14
2017-05-24 18:51:41.575 INFO 20193 --- [ost-startStop-1] o.a.c.c.C.[Tomcat].[localhost].[/] : Initializing Spring embedded WebApplicationContext
2017-05-24 18:51:41.576 INFO 20193 --- [ost-startStop-1] o.s.web.context.ContextLoader : Root WebApplicationContext: initialization completed in 3326 ms
2017-05-24 18:51:41.774 INFO 20193 --- [ost-startStop-1] o.s.b.w.servlet.ServletRegistrationBean : Mapping servlet: 'dispatcherServlet' to [/]
2017-05-24 18:51:41.780 INFO 20193 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'characterEncodingFilter' to: [/*]
2017-05-24 18:51:41.780 INFO 20193 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'hiddenHttpMethodFilter' to: [/*]
2017-05-24 18:51:41.781 INFO 20193 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'httpPutFormContentFilter' to: [/*]
2017-05-24 18:51:41.781 INFO 20193 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'requestContextFilter' to: [/*]
2017-05-24 18:51:42.165 WARN 20193 --- [ main] ationConfigEmbeddedWebApplicationContext : Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactory' parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactoryBuilder' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactoryBuilder' parameter 0; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
2017-05-24 18:51:42.175 INFO 20193 --- [ main] o.apache.catalina.core.StandardService : Stopping service Tomcat
2017-05-24 18:51:42.216 INFO 20193 --- [ main] utoConfigurationReportLoggingInitializer :
Error starting ApplicationContext. To display the auto-configuration report re-run your application with 'debug' enabled.
2017-05-24 18:51:42.230 ERROR 20193 --- [ main] o.s.boot.SpringApplication : Application startup failed
org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactory' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactory' parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactoryBuilder' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactoryBuilder' parameter 0; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:749) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:467) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) ~[spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:737) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:370) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:314) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1162) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1151) [spring-boot-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at hello.Application.main(Application.java:10) [classes/:na]
Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'entityManagerFactoryBuilder' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Unsatisfied dependency expressed through method 'entityManagerFactoryBuilder' parameter 0; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:749) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:467) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 19 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'jpaVendorAdapter' defined in class path resource [org/springframework/boot/autoconfigure/orm/jpa/HibernateJpaAutoConfiguration.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:599) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1173) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1067) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1138) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1066) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 33 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.orm.jpa.JpaVendorAdapter]: Factory method 'jpaVendorAdapter' threw exception; nested exception is java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:189) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:588) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 46 common frames omitted
Caused by: java.lang.NoClassDefFoundError: org/hibernate/HibernateException
at org.springframework.orm.jpa.vendor.HibernateJpaVendorAdapter.<init>(HibernateJpaVendorAdapter.java:64) ~[spring-orm-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration.createJpaVendorAdapter(HibernateJpaAutoConfiguration.java:98) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.JpaBaseConfiguration.jpaVendorAdapter(JpaBaseConfiguration.java:103) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$43210a96.CGLIB$jpaVendorAdapter$4(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$43210a96$$FastClassBySpringCGLIB$$fe55ee4a.invoke(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at org.springframework.cglib.proxy.MethodProxy.invokeSuper(MethodProxy.java:228) ~[spring-core-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.context.annotation.ConfigurationClassEnhancer$BeanMethodInterceptor.intercept(ConfigurationClassEnhancer.java:358) ~[spring-context-4.3.8.RELEASE.jar:4.3.8.RELEASE]
at org.springframework.boot.autoconfigure.orm.jpa.HibernateJpaAutoConfiguration$$EnhancerBySpringCGLIB$$43210a96.jpaVendorAdapter(<generated>) ~[spring-boot-autoconfigure-1.5.3.RELEASE.jar:1.5.3.RELEASE]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_121]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_121]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_121]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_121]
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:162) ~[spring-beans-4.3.8.RELEASE.jar:4.3.8.RELEASE]
... 47 common frames omitted
Caused by: java.lang.ClassNotFoundException: org.hibernate.HibernateException
at java.net.URLClassLoader.findClass(URLClassLoader.java:381) ~[na:1.8.0_121]
at java.lang.ClassLoader.loadClass(ClassLoader.java:424) ~[na:1.8.0_121]
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331) ~[na:1.8.0_121]
at java.lang.ClassLoader.loadClass(ClassLoader.java:357) ~[na:1.8.0_121]
... 60 common frames omitted
I changed my spring.properties file like this
spring.jpa.hibernate.ddl-auto=create
spring.datasource.url=jdbc:mysql://localhost:3306/example
spring.datasource.username=user
spring.datasource.password=root
I imported this project by going in file > new > Import Spring Getting Started Content
Also I having a same problem in eclipse with different project.
Edit: No error now
This time I used eclipse, went to file>new>Spring Starter Project, added depedencies from there and my old project which was giving the same error is now running. Now I can update in database without any problem.
My new pom file looks like this
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>demo</groupId>
<artifactId>demo</artifactId>
<version>0.0.1-SNAPSHOT</version>
<packaging>jar</packaging>
<name>demo</name>
<description>Demo project for Spring Boot</description>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.0.0.BUILD-SNAPSHOT</version>
<relativePath/> <!-- lookup parent from repository -->
</parent>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-jdbc</artifactId>
</dependency>
<!-- <dependency>
<groupId>org.springframework.session</groupId>
<artifactId>spring-session</artifactId>
</dependency> -->
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web-services</artifactId>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-thymeleaf</artifactId>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>spring-snapshots</id>
<name>Spring Snapshots</name>
<url>https://repo.spring.io/snapshot</url>
<snapshots>
<enabled>true</enabled>
</snapshots>
</repository>
<repository>
<id>spring-milestones</id>
<name>Spring Milestones</name>
<url>https://repo.spring.io/milestone</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</repository>
</repositories>
<pluginRepositories>
<pluginRepository>
<id>spring-snapshots</id>
<name>Spring Snapshots</name>
<url>https://repo.spring.io/snapshot</url>
<snapshots>
<enabled>true</enabled>
</snapshots>
</pluginRepository>
<pluginRepository>
<id>spring-milestones</id>
<name>Spring Milestones</name>
<url>https://repo.spring.io/milestone</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</pluginRepository>
</pluginRepositories>
</project>

Check if your pom.xml have this dependency:
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
This will download the Hibernate dependencies, according to https://spring.io/guides/gs/accessing-data-mysql/

Check your spring.properties file which is containing MySQL dialect class or not. If not then please add one of the below property.
spring.jpa.properties.hibernate.dialect = org.hibernate.dialect.MySQL5Dialect
OR
spring.jpa.properties.hibernate.dialect = org.hibernate.dialect.MySQLDialect

This time I used eclipse, went to file>new>Spring Starter Project, added depedencies from there and my old project which was giving the same error is now running. Now I can update in database without any problem. My new pom file looks like this
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>demo</groupId>
<artifactId>demo</artifactId>
<version>0.0.1-SNAPSHOT</version>
<packaging>jar</packaging>
<name>demo</name>
<description>Demo project for Spring Boot</description>
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.0.0.BUILD-SNAPSHOT</version>
<relativePath/> <!-- lookup parent from repository -->
</parent>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-jdbc</artifactId>
</dependency>
<!-- <dependency>
<groupId>org.springframework.session</groupId>
<artifactId>spring-session</artifactId>
</dependency> -->
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web-services</artifactId>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-thymeleaf</artifactId>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>spring-snapshots</id>
<name>Spring Snapshots</name>
<url>https://repo.spring.io/snapshot</url>
<snapshots>
<enabled>true</enabled>
</snapshots>
</repository>
<repository>
<id>spring-milestones</id>
<name>Spring Milestones</name>
<url>https://repo.spring.io/milestone</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</repository>
</repositories>
<pluginRepositories>
<pluginRepository>
<id>spring-snapshots</id>
<name>Spring Snapshots</name>
<url>https://repo.spring.io/snapshot</url>
<snapshots>
<enabled>true</enabled>
</snapshots>
</pluginRepository>
<pluginRepository>
<id>spring-milestones</id>
<name>Spring Milestones</name>
<url>https://repo.spring.io/milestone</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</pluginRepository>
</pluginRepositories>

I found the real reason why it was not working. There was a corrupt jar file downloaded in repository so I deleted the whole maven repo and re downloaded it again.