Perl Process can't find command svn when called from Java - java

I need to automatically execute some perl scripts from Java. I use Runtime.getRuntime().exec to start the perl process. I generate a start-parameter-string and pass it as an argument to exec. The String looks somewhat like this:
cmd /C start /wait perl "path\to\perl\script" -p1 scriptparameter1 -p2 scriptparameter2
I also tried
perl "path\to\perl\script" -p1 scriptparameter1 -p2 scriptparameter2.
If I copy that String and execute it via Windows+R everything works, but via exec the Perl-scripts can't find the svn-command. Why does it make a difference if I execute the perl process from java instead of directly from windows?

I figured it out. The reason was that I had just installed svn and the PATH envirment variable took effect for cmd but not for other processes (for whatevery reason). After a computer restart everything works as expected.

Related

Running java executable with powershell within command prompt

I have a powershell script that is working and runs a java executable. Before I was generating a bunch of powershell script files that were run through the command prompt. Now I want to make it so there does not need to be file creation.
Here is what the line looks like from the working (.ps1) file:
java <mem opts here> "-Doption1=3" "-Doption2=`` ` ``"true`` ` ``" jar.exe
I want to be able to do something like this in command prompt:
Powershell -Command "java <mem opts here> "-Doption1=3" "-Doption2=`` ` ``"true`` ` ``" jar.exe"
Even just asking this question I am having problems with the escape characters. What is the proper way to handle escape characters when you have quotes in quotes in quotes when calling java through powershell through command prompt? (I understand it is a bit messy)
You can lessen the quoting headaches if you focus just on the parts that require quoting (assuming that option value true truly needs quoting):
REM From cmd.exe
C:\> powershell -Command java -Doption1=3 -Doption2="'\"true\"'" jar.exe
The above will make java.exe see:
java -Doption1=3 -Doption2="true" jar.exe
As you can see, even this simple case of the desired resultant quoting is quite obscure, because you're dealing with 3 layers of interpretation:
cmd.exe's own interpretation of the initial command line
PowerShell's interpretation of the arguments it receives.
How PowerShell's translates the arguments into a call to an external program (java.exe).
In any event, the final layer of interpretation is how the target program (java.exe) parses the command line.
That said, in order to call java.exe, i.e. an external program, you don't need PowerShell at all; invoke it directly:
REM From cmd.exe
C:\> java -Doption1=3 -Doption2="true" jar.exe

Restarting process on -XX:OnOutOfMemoryError using shell script gives: Unrecognized option: -9

I'm trying to restart process when OOME happens. Java binary is launched using two shell scripts, one of them imports other. I don't have any control of the first one but can modify the second one as I want.
This is a prototype what I'm trying to do:
First shell script test.sh:
#!/bin/sh
JAVA_OPTS="$JAVA_OPTS -Xmx10m"
. test1.sh
echo $JAVA_OPTS
java $JAVA_OPTS $es_params TestMemory
Second shell script test1.sh:
#!/bin/sh
pidfile="test.pid"
touch $pidfile
params="$parms -Dpidfile=$pidfile"
kill_command="kill -9 \$(cat $pidfile)"
dir=$( cd $(dirname $0) ; pwd -P )
path="$dir/$(basename $0)"
start_command="$path $#"
restart_command="$kill_command;sleep 2;$start_command"
JAVA_OPTS="$JAVA_OPTS -XX:OnOutOfMemoryError=\"$restart_command\""
Generally what it does is JAVA_OPTS is constructed inside test1.sh and then used to run Java binary, which just writes PID in pidfile and then creates OOME.
Problem happens during execution, java can't understand what is a parameter and what is a class to run. I think it might be a problem of quoting, I tried different ways to escape JAVA_OPTS, but without any result. I'm either getting:
Unrecognized option: -9
Error: Could not create the Java Virtual Machine.
Error: A fatal exception has occurred. Program will exit.
Or
Error: Could not find or load main class "-XX:OnOutOfMemoryError=kill
If I just take a value of JAVA_OPTS and put it manually in test.sh it runs perfectly.
Any ideas how can I change test1.sh to make it work? I think I tried almost every possible way of putting double and single quotes, but without any success. Also if I put restart_command in restart.sh file and use it instead of the variable, it works fine.
After running set -x I saw that shell modifies every single space character to ' ' - adds ' on both sides. Escaping doesn't gives any result. Any idea how to avoid this? So final commend is:
+ java -Xmx10m '"-XX:OnOutOfMemoryError=kill' '$(cat' 'test.pid);sleep' '2;/Users/davidt/test/TestMemory/bin/test.sh' '")' -Des.pidfile=test.pid TestMemory
Update
I can run simplified command successfully
java "-XX:OnOutOfMemoryError=echo 'Ups'" $es_params TestMemory
But it seems a general problem, shell just hates spaces into variables I guess:
JAVA_OPTS="\"-XX:OnOutOfMemoryError=echo 'Ups'\""
set -x
java $JAVA_OPTS TestMemory
This script fails and the last line is interpreted as:
java '"-XX:OnOutOfMemoryError=echo' ''\''Ups'\''"' TestMemory
I tried different options to escape
This is a shell problem. Based on the evidence, I'd say that one of the ; characters ... and possibly some why space ... is being interpretted by the shell when you don't want / need this to happen.
If you run set -x in the shell before running the command that is trying to start the JVM, you will see the actual command that is being used.
It seems shell translates every single space to ' ',
Not exactly. The single quotes are inserted by the shell into the output you are getting from set -x. They simply indicating where the argument boundaries are. They are not really there ... and they are certainly NOT being passed to the java command.
Any idea how to [a]void it?
What you need to do is start from the (final) command that you are trying execute ...
java -Xmx10m -XX:OnOutOfMemoryError="kill NNNN;sleep 2;/Users/davidt/test/TestMemory/bin/test.sh" -Des.pidfile=test.pid TestMemory
... and work backwards, so that the shell variables, expansions and escaping give you what you need.
The other thing to note is that this:
java -Xmx10m -XX:OnOutOfMemoryError="kill $(cat test.pid); ..."
probably won't work. The kill $(cat test.pid) command is using shell syntax and requires shell functionality to interpolate the contents of the PID file. I doubt that the JVM is going to know what to do with that. (Or more accurately. It will do what you have literally told it to do, but that will not be what you want ...)
If you really need to interpolate the pid file content when the restart command is run as you appear to be trying to do, then suggest that turn the restart command into a free-standing shell script, and set the file mode so that it is executable. It will be simpler and a lot easier to get working.
As a general piece of advice, is is a bad idea to be too clever with shell scripts. The exact semantics of variable expansion and command parsing are rather tricky, and it is easy to get yourself really confused ... if you are trying to do this at multiple levels.
I ended up put the script I wanted to execute in a separate file and gave it as a parameter to JVM to execute when OOME happens.
echo "echo 'UPS'" >> oome_happened.sh
JAVA_OPTS="\"-XX:OnOutOfMemoryError='oome_happened.sh'\""
set -x
java $JAVA_OPTS TestMemory
Like #DaTval said, you should put the command in a script. The script should be someting like.
#!/bin/bash
kill -9 $PPID
Kill the caller of scripts.

How to run a exe file via unix by passing input parameter

I have created a exe file from jar via converter tools. Jar file was executing fine when I tried to run via unix by passing input parameters eg: java -jar SSS_Infinite.jar test.in 2
However after converting to exe I tried to run by passing input parameters via Unix but its not working and simply returns to the next line. I tried the below command in Unix cmd. Is there any other alternative to make it trigger ?
SSS_Infinite.exe test1.in 2
I assume you created executable for Windows platform, it will not work on *nix systems.
The simplest option will be to build little script that will accept parameters and pass them to java -jar, something like that:
#!/bin/bash
java -jar SSS_Infinite.jar $1 $2
where $1 and $2 are script arguments, see explanation here.
after you create that script and save it as say SSS_Infinite.sh, change its permissions:
chmod +x SSS_Infinite.sh
Then you'll be able to execute it like that:
./SSS_Infinite.sh test1.in 2

Java runtime exec

I am trying to convert various xls files into csv. when I execute the following command in the terminal it works fine
libreoffice --headless --convert-to csv --outdir
/Data/edennis/ /Data/edennis/2013-10/*.xls
but when I try with runtime exec it does not.
Research I've done:
According to this thread Java Runtime exec() behavior cannot execute system commands like echo, but libreoffice is not a system command, isn't it an executable program ?
Java runtime execThis thread recommends to use processBuilder, but not sure if this is what I would need to do in my case.
According to the Java Doc:
EXEC:
Executes the specified string command in a separate process with the
specified environment.
First, there is no reason why Runtime.exec should not be able to run /bin/echo (if available).
Second, yes, use ProcessBuilder.
Third, your problems stem from using shell syntax for file patterns like *.xls. Runtime.exec calls the program you specify, not a shell that would do filename expansion. If you need to do filename expansion, run a shell like:
"sh -c libreoffice --blabla *.xls"

Java option -XX:OnOutOfMemoryError does not work when called through exec in bash script

I have a java application and I want to run a script whenever it experiences and OutOfMemoryException
This works great:
$ java -server -XX:OnOutOfMemoryError="./oom_script %p" TestOOMClass
Unfortunately my application is run by a bash script in production. The script boils down to this:
cmd='java -server -XX:OnOutOfMemoryError="./oom_script %p" TestOOMClass'
##does a lot of checking and cmd building here
exec -a app ${cmd}
When run like this java never respects the double quotes and thinks %p is the class. how do I prevent this? I've tried double escaping but that doesn't work.
Since your program is run as a shell script, I would suggest putting this as the first line in your shell script after the shebang:
set -xv
Then, in the crontab, put 2>&1 at the end of the command line, so STDERR and STDOUT are merged. Crontab usually emails out the STDOUT of a command to root, so you can see what the output is. If not, then apend the following to the end of the command in your crontab:
> /somedir/output.$$ 2>&1
Make sure somedir exists, and after crontab runs your command, you'll see the verbose and debug output. Each line in your shell script will be displayed before it is executed -- both as written and as the shell actually interprets it.
The set -xv becomes very useful in debugging any sell script. There could be all sorts of environmental issues involved between the cronjob and the script running under your login. You might even find a shell issue. For example, crontab usually executes shell scripts in Bourne shell and you probably have Bash or Kornshell as your default shell. Whatever it is, you'll usually find out the issue very quickly when you turn on verbose/debug mode.
You don't even have to do this to the entire script. You can put set -xv anywhere in your script to turn on verbose/debug mode, and set +xv to turn it off.
I could make several pious high minded recommendations (use quotes, don't assume environment things, prefix your command line with "bash -c" to make sure you're using the right shell, etc.), but this would be guessing what could be wrong. In order to really debug this issue, I would need to see the machine, know the OS, see your entire shell script, and understand the entire environment. And, the first thing I would do is add set -xv in your shell script.
Quotes and escaping is an art. I would suggest you add echo ${cmd} before calling exec so you can see what it looks like then.
I would suggest using
cmd='java -server -XX:OnOutOfMemoryError=\\"./oom_script %p\\" TestOOMClass'
instead (untested). You need it to look like \" when being echoed.
an alternative i suggest (to bypass the problem, not solve it indeed) is to rung and bash script and access the $PPID:
PPID The process ID of the shell's parent. This variable is readonly.
then kill the process with that ID (please bare in mind that is an untested suggestion)

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