Why does my program skip files when unzipping by java.util.zip? - java

I read quite a few articles, but I did not find a similar problem and its solution.
I'm try to read all files and some skipped with method zis.getNextEntry
public static void main(String[] args) throws Exception {
String fileZip = "src/main/resources/unzipTest/fias_xml.zip";
ZipInputStream zis = new ZipInputStream(new FileInputStream(fileZip));
ZipEntry entry;
while ((entry = zis.getNextEntry()) != null) {
System.out.println(entry.getName());
}
}
}
But if you unzip with WinRar, for example, everything will be unzipped correctly
Archive files
After running the program
Or how i can see why some files doesn't read?
Can the archive be broken?
After I unzipped and re-zipped the files by using winrar, the program worked correctly. Why was winrar able to do this, but the java code was not?
zipArchive
jdk1.8.0_161

Based on the test i did i able to print each directory and file name correctly.
There 2 scenario came to my mind:
i) the filename length or the complete length is more what the platform can handle. But this also should be same case while do unzip from winrar
ii) Was there any permission issue, but again it won't be selective manner.
can you please let me which jdk version ?
Will u be able to sent me the zip file, I can try to simulate.

public void unzip(String zipFile, String destDir)
{
try
{
int BUFFER = 8*1024;
File file = new File(zipFile);
ZipFile zip = new ZipFile(file);
String newPath = destDir;
new File(newPath).mkdir();
Enumeration zipFileEntries = zip.entries();
while (zipFileEntries.hasMoreElements())
{
ZipEntry entry = (ZipEntry) zipFileEntries.nextElement();
String currentEntry = entry.getName();
File destFile = new File(newPath, currentEntry);
File destinationParent = destFile.getParentFile();
destinationParent.mkdirs();
if (!entry.isDirectory())
{
BufferedInputStream is = new BufferedInputStream(zip
.getInputStream(entry));
int currentByte;
byte[] data = new byte[BUFFER];
FileOutputStream fos = new FileOutputStream(destFile);
BufferedOutputStream dest = new BufferedOutputStream(fos,
BUFFER);
while ((currentByte = is.read(data, 0, BUFFER)) != -1) {
dest.write(data, 0, currentByte);
}
dest.flush();
dest.close();
is.close();
}
}
}
catch (Exception e)
{
System.out.println(e.getMessage());
}
}

Related

Zip file not deleted even if I am getting its correct name and path

I am trying to delete a zip file after unziping. but I am not able to delete it:
if (file.getName().contains(".zip")) {
System.out.println(file.getAbsolutePath()); // I am getting the correct path
file.delete();
System.out.println(file.getName()); // I am getting the correct name Script-1.zip
}
This is the full code
public class Zip4 {
public static void main(String[] args) {
File[] files = new File(args[0]).listFiles();
for(File file : files)
// System.out.println(file.getName());
//if(file.getName().contains("1400") && file.getName().contains(".zip"))
extractFolder(args[0] + file.getName(), args[1]);
DeleteFiles();
// for(File file : files)
// System.out.println("File:C:/1/"+ file.getName());
// extractFolder(args[0]+file.getName(),args[1]);
}
private static void DeleteFiles()
{
File f = null;
File[] paths;
f = new File("D:/Copyof");
paths = f.listFiles();
for(File path:paths)
{
// prints file and directory paths
if(path.getName().contains("J14_0_0RC") || path.getName().contains(".zip") || path.getName().contains(".log"))
{
//System.out.println(path);
path.delete();
}
}
}
private static void extractFolder(String zipFile,String extractFolder)
{
try
{
int BUFFER = 2048;
File file = new File(zipFile);
ZipFile zip = new ZipFile(file);
String newPath = extractFolder;
new File(newPath).mkdir();
Enumeration zipFileEntries = zip.entries();
// Process each entry
while (zipFileEntries.hasMoreElements())
{
// grab a zip file entry
ZipEntry entry = (ZipEntry) zipFileEntries.nextElement();
String currentEntry = entry.getName();
File destFile = new File(newPath, currentEntry);
//destFile = new File(newPath, destFile.getName());
File destinationParent = destFile.getParentFile();
// create the parent directory structure if needed
destinationParent.mkdirs();
if (!entry.isDirectory())
{
BufferedInputStream is = new BufferedInputStream(zip
.getInputStream(entry));
int currentByte;
// establish buffer for writing file
byte data[] = new byte[BUFFER];
// write the current file to disk
FileOutputStream fos = new FileOutputStream(destFile);
BufferedOutputStream dest = new BufferedOutputStream(fos,
BUFFER);
// read and write until last byte is encountered
while ((currentByte = is.read(data, 0, BUFFER)) != -1) {
dest.write(data, 0, currentByte);
}
dest.flush();
dest.close();
fos.flush();
fos.close();
is.close();
}
}
if(file.getName().contains(".zip"))
{
System.out.println(file.getAbsolutePath());
file.delete();
System.out.println(file.getName());
}
}
catch (Exception e)
{
System.out.println("Error: " + e.getMessage());
}
}
}
ZipFile is a closeable resource. So either close() it once you're done in a finally block or create it with try-with-resources (since java7):
try(ZipFile zip = new ZipFile(file)){
//unzip here
}
file.delete();
Apart from this, you should revisit this block
dest.flush();
dest.close();
fos.flush();
fos.close();
is.close();
which is quite prone to resource leaks. If one of the upper calls fails, all subsequent calls are not invoked, resulting in unclosed resources and resource leakage.
So best would be to use try-with-resources here, too.
try(BufferedInputStream is = new BufferedInputStream(zip.getInputStream(entry));
FileOutputStream fos = new FileOutputStream(destFile);
BufferedOutputStream dest = new BufferedOutputStream(fos, BUFFER)) {
//write the data
} //all streams are closed implicitly here
Or use an existing tool for that, for example Apache Commons IO IOUtil.closeQuietly(resource) or embedd every single call into
if(resource != null) {
try{
resource.close();
} catch(IOException e){
//omit
}
}
You could also omit the call to flush() which is done implicitly when closing the resource.

Extracting zip file into a folder throws "Invalid entry size (expected 46284 but got 46285 bytes)" for one of the entry

When I am trying to extract the zip file into a folder as per the below code, for one of the entry (A text File) getting an error as "Invalid entry size (expected 46284 but got 46285 bytes)" and my extraction is stopping abruptly. My zip file contains around 12 text files and 20 TIF files. It is encountering the problem for the text file and is not able to proceed further as it is coming into the Catch block.
I face this problem only in Production Server which is running on Unix and there is no problem with the other servers(Dev, Test, UAT).
We are getting the zip into the servers path through an external team who does the file transfer and then my code starts working to extract the zip file.
...
int BUFFER = 2048;
java.io.BufferedOutputStream dest = null;
String ZipExtractDir = "/y34/ToBeProcessed/";
java.io.File MyDirectory = new java.io.File(ZipExtractDir);
MyDirectory.mkdir();
ZipFilePath = "/y34/work_ZipResults/Test.zip";
// Creating fileinputstream for zip file
java.io.FileInputStream fis = new java.io.FileInputStream(ZipFilePath);
// Creating zipinputstream for using fileinputstream
java.util.zip.ZipInputStream zis = new java.util.zip.ZipInputStream(new java.io.BufferedInputStream(fis));
java.util.zip.ZipEntry entry;
while ((entry = zis.getNextEntry()) != null)
{
int count;
byte data[] = new byte[BUFFER];
java.io.File f = new java.io.File(ZipExtractDir + "/" + entry.getName());
// write the files to the directory created above
java.io.FileOutputStream fos = new java.io.FileOutputStream(ZipExtractDir + "/" + entry.getName());
dest = new java.io.BufferedOutputStream(fos, BUFFER);
while ((count = zis.read(data, 0, BUFFER)) != -1)
{
dest.write(data, 0, count);
}
dest.flush();
dest.close();
}
zis.close();
zis.closeEntry();
}
catch (Exception Ex)
{
System.Out.Println("Exception in \"ExtractZIPFiles\"---- " + Ex.getMessage());
}
I can't understand the problem you're meeting, but here is the method I use to unzip an archive:
public static void unzip(File zip, File extractTo) throws IOException {
ZipFile archive = new ZipFile(zip);
Enumeration<? extends ZipEntry> e = archive.entries();
while (e.hasMoreElements()) {
ZipEntry entry = e.nextElement();
File file = new File(extractTo, entry.getName());
if (entry.isDirectory()) {
file.mkdirs();
} else {
if (!file.getParentFile().exists()) {
file.getParentFile().mkdirs();
}
InputStream in = archive.getInputStream(entry);
BufferedOutputStream out = new BufferedOutputStream(new FileOutputStream(file));
IOUtils.copy(in, out);
in.close();
out.close();
}
}
}
Calling:
File zip = new File("/path/to/my/file.zip");
File extractTo = new File("/path/to/my/destination/folder");
unzip(zip, extractTo);
I never met any issue with the code above, so I hope that could help you.
Off the top of my head, I could think of these reasons:
There could be problem with the encoding of the text file.
The file needs to be read/transferred in "binary" mode.
There could be an issue with the line ending \n or \r\n
The file could simply be corrupt. Try opening the file with a zip utility.

Unable to extract folders from zip file using ZipEntry in windows

java.util.zip.ZipInputStream zis = new java.util.zip.ZipInputStream(new BufferedInputStream(is));
java.util.zip.ZipEntry entry;
new File(outdir+ File.separator+"changelog").delete();
new File(outdir+ File.separator+"media").delete();
try {
while ((entry = zis.getNextEntry()) != null) {
File of = new File(outdir + File.separator + entry.getName());
if (entry.isDirectory()) {
of.mkdirs();
continue;
} else {
File xx = new File(of.getParent());
if (!xx.exists()) {
Stack<String> todo = new Stack<String>();
do {
todo.push(xx.getAbsolutePath());
xx = new File(xx.getParent());
} while (!xx.exists());
while (todo.size() > 0) {
xx = new File(todo.pop());
if (!xx.exists()) {
xx.mkdirs();
}
}
}
}
BufferedOutputStream bos = new BufferedOutputStream(new FileOutputStream(of), buffer.length);
cpio(new BufferedInputStream(zis), bos, "unzip:" + entry.getName());
bos.flush();
bos.close();
}
} catch (IllegalArgumentException e) {
// problem with chars in entry name likely
}catch(Exception e){
System.out.println(e+"Srikanth");
}
zis.close();
}
entry.isDirectory() always returing false so it is creating files instead of directories. What is the problem?
ZipEntry from ZipInputStream representing empty directory at end of file with \ , directory with elements with /
So that entry.isDirectory() not working with empty directory.
Where as ZipEntry from ZipFile working fine. I think there is difference between ZipInputStream and ZipEntry behavior.
isDirectory is not working at all with files zipped with Windows standard option "sent to/ zip files"
The format of the zip is different than format generated with tools like 7zip or Winzip. (Nice to have a standard archive compression :D)

How does one go about finding a specific directory out of a jar/zip file in java?

I have been working on this for quite a few hours. I can't seem to find the issue to this problem. Essentially what I have is this:
I have a jar, let's call it "a.jar"
I need to get the directory "z" and it's contents from "a.jar", but "z" isn't in the root directory of "a.jar".
"z" is in "/x/y/" and "/x/y/" is in "a.jar", so it looks like this:
"a.jar/x/y/z/"
I hope that's a decent explanation. By the way, "a.jar" is what everything is running out of, so its in the class path obviously.
Basically for each ZipEntry you have to check if it isDirectory() and parse that also.
Checkout this link:
http://www.javaworld.com/javaworld/javatips/jw-javatip49.html
LE:
Here is a complete example that extracts the files from the jar, and if you specify a specific path it will extract only that folder:
public void doUnzip(String inputZip, String destinationDirectory, String specificPath)
throws IOException {
int BUFFER = 2048;
File sourceZipFile = new File(inputZip);
File unzipDestinationDirectory = new File(destinationDirectory);
unzipDestinationDirectory.mkdir();
ZipFile zipFile;
// Open Zip file for reading
zipFile = new ZipFile(sourceZipFile, ZipFile.OPEN_READ);
// Create an enumeration of the entries in the zip file
Enumeration<?> zipFileEntries = zipFile.entries();
// Process each entry
while (zipFileEntries.hasMoreElements()) {
// grab a zip file entry
ZipEntry entry = (ZipEntry) zipFileEntries.nextElement();
if(specificPath != null){
if(entry.getName().startsWith(specificPath) == false)
continue;
}
File destFile = new File(unzipDestinationDirectory, entry.getName());
// create the parent directory structure if needed
destFile.getParentFile().mkdirs();
try {
// extract file if not a directory
if (!entry.isDirectory()) {
BufferedInputStream is = new BufferedInputStream(
zipFile.getInputStream(entry));
// establish buffer for writing file
byte data[] = new byte[BUFFER];
// write the current file to disk
FileOutputStream fos = new FileOutputStream(destFile);
BufferedOutputStream dest = new BufferedOutputStream(fos,
BUFFER);
// read and write until last byte is encountered
for (int bytesRead; (bytesRead = is.read(data, 0, BUFFER)) != -1;) {
dest.write(data, 0, bytesRead);
}
dest.flush();
dest.close();
is.close();
}
} catch (IOException ioe) {
ioe.printStackTrace();
}
}
zipFile.close();
}
public static void main(String[] args) {
Unzip unzip = new Unzip();
try {
unzip.doUnzip("test.jar", "output", "x/y/z");
} catch (IOException e) {
e.printStackTrace();
}
}
..(ZipEntry), but they don't work very well with sub-directories.
They work just fine. Iterate the entries and simply check the path equates to that sub-directory. If it does, add it to a list (or process it, whatever).

IOException - Access Denied Using FileOutputStream

I get the following IOException :
java.io.IOException: Access is denied
at java.io.WinNTFileSystem.createFileExclusively(Native Method)
at java.io.File.createNewFile(File.java:850)
at zipUnzipper.main(zipUnzipper.java:41)
When trying to run the following piece of code :
public class zipUnzipper {
public zipUnzipper() {
}
public static void main(String[] args){
//Unzip to temp folder. Add all files to mFiles. Print names of all files in mFfiles.
File file = new File("C:\\aZipFile.zip");
String filename = file.getName();
String filePathName = new String();
int o = filename.lastIndexOf('.');
filename = filename.substring(0,o);
try {
ZipFile zipFile = new ZipFile (file.getAbsoluteFile());
Enumeration entries = zipFile.entries();
while(entries.hasMoreElements()) {
ZipEntry zipEntry = (ZipEntry) entries.nextElement();
System.out.println("Unzipping: " + zipEntry.getName());
BufferedInputStream bis = new BufferedInputStream(zipFile.getInputStream(zipEntry));
byte[] buffer = new byte[2048];
filePathName = "C:\\TEMP\\"+filename+"\\";
File fileToWrite = new File(filePathName+ zipEntry.getName());
fileToWrite.mkdirs();
fileToWrite.createNewFile();
FileOutputStream fos = new FileOutputStream(fileToWrite);
BufferedOutputStream bos = new BufferedOutputStream( fos , buffer.length );
int size;
while ((size = bis.read(buffer, 0, buffer.length)) != -1) {
bos.write(buffer, 0, size);
}
bos.flush();
bos.close();
bis.close();
}
zipFile.close();
File folder = new File (filePathName);
File [] mFiles = folder.listFiles();
for (int x=0; x<mFiles.length; x++) {
System.out.println(mFiles[x].getAbsolutePath());
}
} catch (ZipException ze) {
ze.printStackTrace();
} catch (IOException ioe) {
ioe.printStackTrace();
}
}
}
It seems to me that for some reason the JVM can't create a new file. The code runs perfectly well if the files already exist. Is there some kind of access file which dictates whether the JVM can create a new file or am I simply doing something wrong?
Any help is much appreciated :-)
I'm running Java 1.4 and have been testing in JDeveloper in Windows XP.
The issue is that these calls step on each other:
fileToWrite.mkdirs(); //creates a directory e.g. C:\temp\foo\x
fileToWrite.createNewFile(); //attempts to create a file C:\temp\foo\x
The create operation fails because you just created a directory with the same name than the file you want to create.
What you want to do instead is:
fileToWrite.getParentFile().mkdirs()
And also, the call to createNewFile() is unnecessary.
Based on your code. The following "unzips" a zip file:
import java.io.*;
import java.util.zip.ZipFile;
import java.util.zip.ZipEntry;
import java.util.Enumeration;
public class Unzipper {
public static void main(String[] args)
throws IOException {
final File file = new File(args[0]);
final ZipFile zipFile = new ZipFile(file);
final byte[] buffer = new byte[2048];
final File tmpDir = new File(System.getProperty("java.io.tmpdir"), zipFile.getName());
if(!tmpDir.mkdir() && tmpDir.exists()) {
System.err.println("Cannot create: " + tmpDir);
System.exit(0);
}
for(final Enumeration entries = zipFile.entries(); entries.hasMoreElements();) {
final ZipEntry zipEntry = (ZipEntry) entries.nextElement();
System.out.println("Unzipping: " + zipEntry.getName());
final InputStream is = zipFile.getInputStream(zipEntry);
final File fileToWrite = new File(tmpDir, zipEntry.getName());
final File folder = fileToWrite.getParentFile();
if(!folder.mkdirs() && !folder.exists()) {
System.err.println("Cannot create: " + folder);
System.exit(0);
}
if(!zipEntry.isDirectory()) {
//No need to use buffered streams since we're doing our own buffering
final FileOutputStream fos = new FileOutputStream(fileToWrite);
int size;
while ((size = is.read(buffer)) != -1) {
fos.write(buffer, 0, size);
}
fos.close();
is.close();
}
}
zipFile.close();
}
}
Disclaimer: I haven't tested it beyond the very basics.
Why are you calling createNewFile()? Just create the FileOutputStream.
It also could be that in context where you are launching the application you haven't access rights to the place where you are trying to create the file. Launch the app as admin or create the file in the project folder.

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